Carboxypeptidase A: Difference between revisions

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==Structure==
==Structure==
Bovine CPA exists as a single unit with [http://en.wikipedia.org/wiki/Molecular_symmetry C1 symmetry] in the pancreatic physiological environment.  According to [http://www.rcsb.org/pdb/explore/remediatedSequence.do?structureId=3CPA structural information] deposited in the PDB database, the single polypeptide chain of CPA contains a mixture of <scene name='69/694222/3cpasecondarystructure/2'>α-helices and β-sheets</scene>; there are a total of 11 helices (one [http://en.wikipedia.org/wiki/310_helix 3<sub>10</sub>] helix and eight [http://en.wikipedia.org/wiki/Alpha_helix 3.6<sub>13</sub>] helicies), as well as ten [http://en.wikipedia.org/wiki/Beta_sheet β-sheets].  The helices are shown in magenta whereas the β-sheets are displayed in yellow.  A [http://en.wikibooks.org/wiki/Structural_Biochemistry/Chemical_Bonding/_Disulfide_bonds disulfide bond] connects the residues Cys138 and Cys161.  The disulfide bond can be seen in yellow in the <scene name='69/694222/1cpx_default/3'>original rotating figure</scene>.
Bovine CPA exists as a monomeric unit with [http://en.wikipedia.org/wiki/Molecular_symmetry C1 symmetry] in the pancreatic physiological environment.  The single polypeptide chain of CPA contains a mixture of <scene name='69/694222/3cpasecondarystructure/2'>α-helices and β-sheets</scene>; the helices are shown in magenta whereas the β-sheets are displayed in yellow.  A [http://en.wikibooks.org/wiki/Structural_Biochemistry/Chemical_Bonding/_Disulfide_bonds disulfide bond] connects the residues Cys138 and Cys161, which can be seen in yellow in the <scene name='69/694222/1cpx_default/3'>original rotating figure</scene>.


Six different biologically active forms of the CPA monomeric unit exist.  <scene name='69/694222/1cpxcleavageforms/2'>Three of these active forms</scene> are produced following the cleavage of amino acid residue segments from the initial [http://en.wikipedia.org/wiki/Zymogen zymogen], or proenzyme, by trypsin and chymotrypsin, which are also found in the pancreas.  Cleavage by trypsin generates either the '''α-form''' (residues Ala1-Asn307) or the '''β-form''' (residues Ser3-Asn307).  Chymotrypsin cleavage generates the '''γ-form''' (residues Asn8-Asn307).  The α-form essentially is the protein without any additional residue cleavages.  The Ala and Arg residues, shown in red and white respectively, are cleaved in the β-form.  In addition to the red and white residues, the residues displayed in cyan are cleaved to give the γ-form.  The <scene name='69/694222/3cpageneticforms/3'>other three active forms</scene> of CPA arise from [http://en.wikipedia.org/wiki/Genetic_variation genetic variation] in residues located at three separate positions on the polypeptide chain.  The differences include the following: Ile/Val179, Ala/Glu228, and Val/Leu305.<ref name="CPA1" />  Each of the six biologically active monomeric units carry out the same function of hydrolyzing the C-terminal [http://en.wikipedia.org/wiki/Peptide_bond peptide bond] of a polypeptide substrate.
Six different biologically active forms of the CPA monomeric unit exist.  <scene name='69/694222/1cpxcleavageforms/2'>Three of these active forms</scene> are produced following the cleavage of amino acid residue segments from the initial [http://en.wikipedia.org/wiki/Zymogen zymogen], or proenzyme, by trypsin and chymotrypsin, which are also found in the pancreas.  Cleavage by trypsin generates either the '''α-form''' (residues Ala1-Asn307) or the '''β-form''' (residues Ser3-Asn307).  Chymotrypsin cleavage generates the '''γ-form''' (residues Asn8-Asn307).  The α-form essentially is the protein without any additional residue cleavages.  The Ala and Arg residues, shown in red and white respectively, are cleaved in the β-form.  In addition to the red and white residues, the residues displayed in cyan are cleaved to give the γ-form.  The <scene name='69/694222/3cpageneticforms/3'>other three active forms</scene> of CPA arise from [http://en.wikipedia.org/wiki/Genetic_variation genetic variation] in residues located at three separate positions on the polypeptide chain.  The differences include the following: Ile/Val179, Ala/Glu228, and Val/Leu305.<ref name="CPA1" />  Each of the six biologically active monomeric units carry out the same function of hydrolyzing the C-terminal [http://en.wikipedia.org/wiki/Peptide_bond peptide bond] of a polypeptide substrate.

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Geoffrey C. Hoops, Michael Melbardis, Douglas Schnell, Thomas Baldwin, Michal Harel