5ghc: Difference between revisions

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'''Unreleased structure'''


The entry 5ghc is ON HOLD  until Jun 19 2018
==SOLUTION STRUCTURE OF LYS33 ACETYLATED HUMAN SUMO2==
 
<StructureSection load='5ghc' size='340' side='right' caption='[[5ghc]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
Authors: Naik, M.T., Naik, N., Shih, H., Huang, T.
== Structural highlights ==
 
<table><tr><td colspan='2'>[[5ghc]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5GHC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5GHC FirstGlance]. <br>
Description: SOLUTION STRUCTURE OF LYS33 ACETYLATED HUMAN SUMO2
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=ALY:N(6)-ACETYLLYSINE'>ALY</scene></td></tr>
[[Category: Unreleased Structures]]
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2n1w|2n1w]], [[5b7a|5b7a]], [[5ghd|5ghd]], [[5ghb|5ghb]]</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SUMO2, SMT3B, SMT3H2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5ghc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ghc OCA], [http://pdbe.org/5ghc PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5ghc RCSB], [http://www.ebi.ac.uk/pdbsum/5ghc PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5ghc ProSAT]</span></td></tr>
</table>
== Function ==
[[http://www.uniprot.org/uniprot/SUMO2_HUMAN SUMO2_HUMAN]] Ubiquitin-like protein that can be covalently attached to proteins as a monomer or as a lysine-linked polymer. Covalent attachment via an isopeptide bond to its substrates requires prior activation by the E1 complex SAE1-SAE2 and linkage to the E2 enzyme UBE2I, and can be promoted by an E3 ligase such as PIAS1-4, RANBP2 or CBX4. This post-translational modification on lysine residues of proteins plays a crucial role in a number of cellular processes such as nuclear transport, DNA replication and repair, mitosis and signal transduction. Polymeric SUMO2 chains are also susceptible to polyubiquitination which functions as a signal for proteasomal degradation of modified proteins.<ref>PMID:9556629</ref> <ref>PMID:18538659</ref> <ref>PMID:18408734</ref> 
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Human]]
[[Category: Huang, T]]
[[Category: Huang, T]]
[[Category: Naik, M.T]]
[[Category: Naik, M T]]
[[Category: Naik, N]]
[[Category: Naik, N]]
[[Category: Shih, H]]
[[Category: Shih, H]]
[[Category: Acetylated protein]]
[[Category: Structural genomic]]
[[Category: Ubiquitin-like protein]]

Revision as of 13:39, 16 November 2017

SOLUTION STRUCTURE OF LYS33 ACETYLATED HUMAN SUMO2SOLUTION STRUCTURE OF LYS33 ACETYLATED HUMAN SUMO2

Structural highlights

5ghc is a 1 chain structure with sequence from Human. Full experimental information is available from OCA. For a guided tour on the structure components use FirstGlance.
NonStd Res:
Gene:SUMO2, SMT3B, SMT3H2 (HUMAN)
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

[SUMO2_HUMAN] Ubiquitin-like protein that can be covalently attached to proteins as a monomer or as a lysine-linked polymer. Covalent attachment via an isopeptide bond to its substrates requires prior activation by the E1 complex SAE1-SAE2 and linkage to the E2 enzyme UBE2I, and can be promoted by an E3 ligase such as PIAS1-4, RANBP2 or CBX4. This post-translational modification on lysine residues of proteins plays a crucial role in a number of cellular processes such as nuclear transport, DNA replication and repair, mitosis and signal transduction. Polymeric SUMO2 chains are also susceptible to polyubiquitination which functions as a signal for proteasomal degradation of modified proteins.[1] [2] [3]

References

  1. Kamitani T, Kito K, Nguyen HP, Fukuda-Kamitani T, Yeh ET. Characterization of a second member of the sentrin family of ubiquitin-like proteins. J Biol Chem. 1998 May 1;273(18):11349-53. PMID:9556629
  2. Meulmeester E, Kunze M, Hsiao HH, Urlaub H, Melchior F. Mechanism and consequences for paralog-specific sumoylation of ubiquitin-specific protease 25. Mol Cell. 2008 Jun 6;30(5):610-9. doi: 10.1016/j.molcel.2008.03.021. PMID:18538659 doi:10.1016/j.molcel.2008.03.021
  3. Tatham MH, Geoffroy MC, Shen L, Plechanovova A, Hattersley N, Jaffray EG, Palvimo JJ, Hay RT. RNF4 is a poly-SUMO-specific E3 ubiquitin ligase required for arsenic-induced PML degradation. Nat Cell Biol. 2008 May;10(5):538-46. doi: 10.1038/ncb1716. Epub 2008 Apr 13. PMID:18408734 doi:10.1038/ncb1716
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