3lgx: Difference between revisions

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==Structure of probable D-alanine-poly(phosphoribitol) ligase subunit-1 from Streptococcus pyogenes with ATP==
==Structure of probable D-alanine-poly(phosphoribitol) ligase subunit-1 from Streptococcus pyogenes with ATP==
<StructureSection load='3lgx' size='340' side='right' caption='[[3lgx]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
<StructureSection load='3lgx' size='340' side='right' caption='[[3lgx]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">dltA, M5005_Spy1073, SPy_1312 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=160490 Streptococcus pyogenes (serotype 1 / M1 GAS)])</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">dltA, M5005_Spy1073, SPy_1312 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=160490 Streptococcus pyogenes (serotype 1 / M1 GAS)])</td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/D-alanine--poly(phosphoribitol)_ligase D-alanine--poly(phosphoribitol) ligase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.1.1.13 6.1.1.13] </span></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/D-alanine--poly(phosphoribitol)_ligase D-alanine--poly(phosphoribitol) ligase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.1.1.13 6.1.1.13] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3lgx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lgx OCA], [http://pdbe.org/3lgx PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3lgx RCSB], [http://www.ebi.ac.uk/pdbsum/3lgx PDBsum]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3lgx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lgx OCA], [http://pdbe.org/3lgx PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3lgx RCSB], [http://www.ebi.ac.uk/pdbsum/3lgx PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3lgx ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[Category: Atp binding protein]]
[[Category: Atp binding protein]]
[[Category: Atp-binding]]
[[Category: Atp-binding]]
[[Category: Cytoplasm]]
[[Category: Nucleotide-binding]]
[[Category: Nucleotide-binding]]
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]]
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]]
[[Category: PSI, Protein structure initiative]]
[[Category: PSI, Protein structure initiative]]

Revision as of 11:55, 1 November 2017

Structure of probable D-alanine-poly(phosphoribitol) ligase subunit-1 from Streptococcus pyogenes with ATPStructure of probable D-alanine-poly(phosphoribitol) ligase subunit-1 from Streptococcus pyogenes with ATP

Structural highlights

3lgx is a 4 chain structure with sequence from Streptococcus pyogenes (serotype 1 / m1 gas). Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:
Gene:dltA, M5005_Spy1073, SPy_1312 (Streptococcus pyogenes (serotype 1 / M1 GAS))
Activity:D-alanine--poly(phosphoribitol) ligase, with EC number 6.1.1.13
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

[DLTA_STRP1] Involved in the biosynthesis of D-alanyl-lipoteichoic acid (LTA). Catalyzes an ATP-dependent two-step reaction where it forms a high energy D-alanyl AMP intermediate and transfers the alanyl residues from AMP to Dcp (By similarity).

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3lgx, resolution 2.60Å

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OCA