5tqp: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
No edit summary
No edit summary
Line 1: Line 1:
'''Unreleased structure'''


The entry 5tqp is ON HOLD  until Paper Publication
==LIPOXYGENASE-1 (SOYBEAN) I553G MUTANT AT 300K==
 
<StructureSection load='5tqp' size='340' side='right' caption='[[5tqp]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
Authors: Poss, E.M., Fraser, J.S.
== Structural highlights ==
 
<table><tr><td colspan='2'>[[5tqp]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5TQP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5TQP FirstGlance]. <br>
Description: LIPOXYGENASE-1 (SOYBEAN) I553G MUTANT AT 300K
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene></td></tr>
[[Category: Unreleased Structures]]
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5tqo|5tqo]], [[5tqn|5tqn]], [[5tr0|5tr0]]</td></tr>
[[Category: Poss, E.M]]
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Oxidoreductase Oxidoreductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.13.11.12 1.13.11.12] </span></td></tr>
[[Category: Fraser, J.S]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5tqp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5tqp OCA], [http://pdbe.org/5tqp PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5tqp RCSB], [http://www.ebi.ac.uk/pdbsum/5tqp PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5tqp ProSAT]</span></td></tr>
</table>
== Function ==
[[http://www.uniprot.org/uniprot/LOX1_SOYBN LOX1_SOYBN]] Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. With linoleate as substrate, L-1 shows a preference for carbon 13 as the site for hydroperoxidation (in contrast to L-2 and L-3, which utilize either carbon 9 or 13). At pH above 8.5, only (9Z,11E,13S)-13-hydroperoxyoctadeca-9,11-dienoate is produced, but as the pH decreases, the proportion of (9S)-hydroperoxide increases linearly until at pH 6.0 it represents about 25 % of the products.<ref>PMID:16157595</ref> 
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Oxidoreductase]]
[[Category: Fraser, J S]]
[[Category: Poss, E M]]
[[Category: Hydrogen tunneling]]
[[Category: Lipoxygenase]]

Revision as of 09:30, 1 November 2017

LIPOXYGENASE-1 (SOYBEAN) I553G MUTANT AT 300KLIPOXYGENASE-1 (SOYBEAN) I553G MUTANT AT 300K

Structural highlights

5tqp is a 2 chain structure. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:
Activity:Oxidoreductase, with EC number 1.13.11.12
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

[LOX1_SOYBN] Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. With linoleate as substrate, L-1 shows a preference for carbon 13 as the site for hydroperoxidation (in contrast to L-2 and L-3, which utilize either carbon 9 or 13). At pH above 8.5, only (9Z,11E,13S)-13-hydroperoxyoctadeca-9,11-dienoate is produced, but as the pH decreases, the proportion of (9S)-hydroperoxide increases linearly until at pH 6.0 it represents about 25 % of the products.[1]

References

  1. Coffa G, Imber AN, Maguire BC, Laxmikanthan G, Schneider C, Gaffney BJ, Brash AR. On the relationships of substrate orientation, hydrogen abstraction, and product stereochemistry in single and double dioxygenations by soybean lipoxygenase-1 and its Ala542Gly mutant. J Biol Chem. 2005 Nov 18;280(46):38756-66. Epub 2005 Sep 12. PMID:16157595 doi:http://dx.doi.org/10.1074/jbc.M504870200

5tqp, resolution 1.70Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA