5iu0: Difference between revisions

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'''Unreleased structure'''


The entry 5iu0 is ON HOLD  until Jun 17 2018
==Rubisco from Arabidopsis thaliana==
 
<StructureSection load='5iu0' size='340' side='right' caption='[[5iu0]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
Authors: Valegaard, K., Hasse, D., Gunn, L., Andersson, I.
== Structural highlights ==
 
<table><tr><td colspan='2'>[[5iu0]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5IU0 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5IU0 FirstGlance]. <br>
Description: Rubisco from Arabidopsis thaliana
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CAP:2-CARBOXYARABINITOL-1,5-DIPHOSPHATE'>CAP</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
[[Category: Unreleased Structures]]
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=KCX:LYSINE+NZ-CARBOXYLIC+ACID'>KCX</scene></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Ribulose-bisphosphate_carboxylase Ribulose-bisphosphate carboxylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.39 4.1.1.39] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5iu0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5iu0 OCA], [http://pdbe.org/5iu0 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5iu0 RCSB], [http://www.ebi.ac.uk/pdbsum/5iu0 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5iu0 ProSAT]</span></td></tr>
</table>
== Function ==
[[http://www.uniprot.org/uniprot/RBL_ARATH RBL_ARATH]] RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site.[HAMAP-Rule:MF_01338] [[http://www.uniprot.org/uniprot/RBS1B_ARATH RBS1B_ARATH]] RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site (By similarity).  
__TOC__
</StructureSection>
[[Category: Arabidopsis thaliana]]
[[Category: Ribulose-bisphosphate carboxylase]]
[[Category: Andersson, I]]
[[Category: Gunn, L]]
[[Category: Hasse, D]]
[[Category: Hasse, D]]
[[Category: Valegaard, K]]
[[Category: Valegaard, K]]
[[Category: Gunn, L]]
[[Category: Lyase]]
[[Category: Andersson, I]]
[[Category: Ribulose-bisphosphate-carboxylase]]

Revision as of 13:17, 10 September 2017

Rubisco from Arabidopsis thalianaRubisco from Arabidopsis thaliana

Structural highlights

5iu0 is a 4 chain structure with sequence from Arabidopsis thaliana. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:, ,
NonStd Res:
Activity:Ribulose-bisphosphate carboxylase, with EC number 4.1.1.39
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

[RBL_ARATH] RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site.[HAMAP-Rule:MF_01338] [RBS1B_ARATH] RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site (By similarity).

5iu0, resolution 1.50Å

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OCA