Lipase: Difference between revisions
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Michal Harel (talk | contribs) No edit summary |
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**[[1hpl]] – hLip – horse <br /> | **[[1hpl]] – hLip – horse <br /> | ||
**[[1hlg]] – hLip – human - gastric<br /> | **[[1hlg]] – hLip – human - gastric<br /> | ||
**[[1jmy]] – hBSSL <br /> | **[[1jmy]] – hBSSL <br /> | ||
**[[1akn]] – cBSSL – cattle <br /> | **[[1akn]] – cBSSL – cattle <br /> | ||
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**[[1gpl]] – Lip – Guinea pig<br /> | **[[1gpl]] – Lip – Guinea pig<br /> | ||
**[[3zpx]] – Lip – ''Ustilago maydis''<br /> | **[[3zpx]] – Lip – ''Ustilago maydis''<br /> | ||
**[[4l3w]] – Lip catalytic domain – bread mold<br /> | |||
**[[4zrd]], [[4zre]] – Lip1 (mutant) – dandruff fungus<br /> | |||
*Prokaryote lipase: | *Prokaryote lipase: | ||
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**[[3guu]], [[1lbs]], [[1lbt]], [[1tca]], [[1tcb]], [[1tcc]] – CaLipA – ''Candida antarctica''<br /> | **[[3guu]], [[1lbs]], [[1lbt]], [[1tca]], [[1tcb]], [[1tcc]] – CaLipA – ''Candida antarctica''<br /> | ||
**[[2veo]] – CaLipA – closed state<br /> | **[[2veo]] – CaLipA – closed state<br /> | ||
**[[4k6g]] – CaLipB<br /> | **[[4k6g]], [[4zv7]], [[3w9b]], [[5a6v]], [[5a71]] – CaLipB<br /> | ||
**[[3icv]], [[4k5q]], [[4k6h]], [[4k6k]] – CaLipB (mutant) <br /> | **[[3icv]], [[4k5q]], [[4k6h]], [[4k6k]] – CaLipB (mutant) <br /> | ||
**[[1gz7]], [[1lpm]], [[1lps]]– CrLip 2 – ''Candida rugosa'' - closed state<br /> | **[[1gz7]], [[1lpm]], [[1lps]]– CrLip 2 – ''Candida rugosa'' - closed state<br /> | ||
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**[[2fx5]] – Lip – ''Pseudomonas mendocina''<br /> | **[[2fx5]] – Lip – ''Pseudomonas mendocina''<br /> | ||
**[[1yzf]] – Lip – ''Enterococcus faecalis''<br /> | **[[1yzf]] – Lip – ''Enterococcus faecalis''<br /> | ||
**[[1dt3]], [[1dt5]], [[1dte]], [[1du4]], [[1ein]], [[1tib]], [[4dyh]], [[4ea6]], [[4flf]], [[4gbg]], [[4gwl]] - TlLip - ''Thermomyces lanuginose''<br /> | **[[1dt3]], [[1dt5]], [[1dte]], [[1du4]], [[1ein]], [[1tib]], [[4dyh]], [[4ea6]], [[4flf]], [[4gbg]], [[4gwl]], [[4zgb]] - TlLip - ''Thermomyces lanuginose''<br /> | ||
**[[5ap9]] – TlLip (mutant)<br /> | |||
**[[1jfr]] – Lip – ''Streptomyces exfoliates''<br /> | **[[1jfr]] – Lip – ''Streptomyces exfoliates''<br /> | ||
**[[5mal]] – Lip – ''Streptomyces rimosus''<br /> | |||
**[[1oil]] – BcLip - ''Burkholderia cepacia''<br /> | **[[1oil]] – BcLip - ''Burkholderia cepacia''<br /> | ||
**[[2lip]] – BcLip – open state<br /> | **[[2lip]] – BcLip – open state<br /> | ||
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**[[3lip]], [[3a6z]] - Lip - ''Pseudomonas cepacia'' – open state<br /> | **[[3lip]], [[3a6z]] - Lip - ''Pseudomonas cepacia'' – open state<br /> | ||
**[[1qge]], [[1tah]] – Lip – ''Pseudomonas glumae''<br /> | **[[1qge]], [[1tah]] – Lip – ''Pseudomonas glumae''<br /> | ||
**[[2w22]] – | **[[2w22]] – GtLip – ''Geobacillus thermocatenulatus''<br /> | ||
**[[1ji3]], [[1ku0]], [[4fmp]] – | **[[5ce5]] – GtLip (mutant)<br /> | ||
**[[1ji3]], [[1ku0]], [[4fmp]], [[4x6u]]– BstLip – ''Bacillus stearothermophilus''<br /> | |||
**[[4x71]], [[4x7b]], [[4x85]] – BstLip (mutant)<br /> | |||
**[[1ah7]] - Lip – ''Bacillus cereus''<br /> | **[[1ah7]] - Lip – ''Bacillus cereus''<br /> | ||
**[[2qxt]], [[2qxu]], [[1isp]], [[1i6w]], [[4fdm]] - BsLip – ''Bacillus subtilis''<br /> | **[[2qxt]], [[2qxu]], [[1isp]], [[1i6w]], [[4fdm]], [[5ct5]], [[5ct6]] - BsLip – ''Bacillus subtilis''<br /> | ||
**[[3d2a]], [[3d2b]], [[3d2c]], [[1t2n]], [[1t4m]], [[3qmm]], [[3qzu]], [[4fkb]] - BsLip (mutant) <br /> | **[[3d2a]], [[3d2b]], [[3d2c]], [[1t2n]], [[1t4m]], [[3qmm]], [[3qzu]], [[4fkb]], [[5ct8]] - BsLip (mutant) <br /> | ||
**[[2ory]] – Lip – ''Photobacterium lypoliticum''<br /> | **[[2ory]] – Lip – ''Photobacterium lypoliticum''<br /> | ||
**[[2z5g]], [[2dsn]] – GzLip T1 – ''Geobacillus zalihae''<br /> | **[[2z5g]], [[2dsn]] – GzLip T1 – ''Geobacillus zalihae''<br /> | ||
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**[[3uue]], [[3uuf]] – Lip – ''Malassezia globosa''<br /> | **[[3uue]], [[3uuf]] – Lip – ''Malassezia globosa''<br /> | ||
**[[4hs9]] – Lip – ''Proteus mirabilis''<br /> | **[[4hs9]] – Lip – ''Proteus mirabilis''<br /> | ||
**[[4opm]] – Lip – ''Acinetobacter baumannii''<br /> | |||
**[[5ah0]] – Lip – ''Pelosinus fermentans''<br /> | |||
**[[5ah1]] – Lip – ''Clostridium botulinum''<br /> | |||
**[[5ch8]] – Lip (mutant) – ''Penicillium cyclopium''<br /> | |||
*Lipase/colipase complexes. The colipase is a co-enzyme whose binding to lipase optimizes the enzymatic activity | *Lipase/colipase complexes. The colipase is a co-enzyme whose binding to lipase optimizes the enzymatic activity | ||
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*Lipase + inhibitors | *Lipase + inhibitors | ||
**[[3l1h]] – EstE5(LIPE)+FeCl3 – noninvasive inhibitor<br /> | **[[3l1h]] – EstE5(LIPE)+FeCl3 – noninvasive inhibitor<br /> | ||
**[[3l1i]], [[3l1j]] - EstE5(LIPE)+CuSO4 – noninvasive inhibitor<br /> | **[[3l1i]], [[3l1j]] - EstE5(LIPE)+CuSO4 – noninvasive inhibitor<br /> | ||
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**[[4kjx]] - TlLip + nitrobenzaldehyde + lauric acid<br /> | **[[4kjx]] - TlLip + nitrobenzaldehyde + lauric acid<br /> | ||
**[[4n8s]] - TlLip + nitrobenzaldehyde + ethylacetoacetate<br /> | **[[4n8s]] - TlLip + nitrobenzaldehyde + ethylacetoacetate<br /> | ||
**[[4s0x]] – TlLip + lauric acid<br /> | |||
*Lipase conjugated with analogs to its reaction intermediates | *Lipase conjugated with analogs to its reaction intermediates | ||
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**[[4ke7]], [[4ke8]], [[4ke9]] – BaMAGL + ligand<br /> | **[[4ke7]], [[4ke8]], [[4ke9]] – BaMAGL + ligand<br /> | ||
**[[4ke6]], [[4kea]] – BaMAGL (mutant) + ligand<br /> | **[[4ke6]], [[4kea]] – BaMAGL (mutant) + ligand<br /> | ||
**[[3jwe]], [[3pe6]] – hMAGL + inhibitor<br /> | **[[3jwe]], [[3pe6]], [[4uuq]] – hMAGL + inhibitor<br /> | ||
**[[4zwn]] – yMAGL – yeast<br /> | |||
**[[4zxf]] – yMAGLip + substrate analog<br /> | |||
*Lipase with substrate bound at active site | *Lipase with substrate bound at active site | ||