Sandbox Reserved 1053: Difference between revisions
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== Structural Overview == | == Structural Overview == | ||
CzrA functions as a [https://en.wikipedia.org/wiki/Dimer_(chemistry) dimer]. The <scene name='69/694218/Monomeric_unit/1'>monomeric units</scene> dimerize at the czr operon, repressing gene transcription. Each monomeric unit contains <scene name='69/694218/Helices/1'>five alpha helices</scene> seen in purple and <scene name='69/694218/B_sheets/1'>two beta sheets</scene> displayed in yellow. While the function of the [https://en.wikipedia.org/wiki/Beta_sheet beta sheets] are not yet known, key [https://en.wikipedia.org/wiki/Alpha_helix helices] regulate the binding of DNA and Zn<sup> +2 </sup>. The <scene name='69/694220/2kjb_colored_alpha_4/1'>alpha 4 helices</scene> are the location of DNA binding and the <scene name='69/694220/ | CzrA functions as a [https://en.wikipedia.org/wiki/Dimer_(chemistry) dimer]. The <scene name='69/694218/Monomeric_unit/1'>monomeric units</scene> dimerize at the czr operon, repressing gene transcription. Each monomeric unit contains <scene name='69/694218/Helices/1'>five alpha helices</scene> seen in purple and <scene name='69/694218/B_sheets/1'>two beta sheets</scene> displayed in yellow. While the function of the [https://en.wikipedia.org/wiki/Beta_sheet beta sheets] are not yet known, key [https://en.wikipedia.org/wiki/Alpha_helix helices] regulate the binding of DNA and Zn<sup> +2 </sup>. The <scene name='69/694220/2kjb_colored_alpha_4/1'>alpha 4 helices</scene> are the location of DNA binding and the <scene name='69/694220/Zinc_pocket_with_residues/1'>alpha 5 helics</scene> contain the Zn<sup> +2 </sup> binding site. As Zn<sup> +2 </sup> binds, the alpha 4 helices are <scene name='69/694220/2kjc_colored_alpha_4/1'>pushed out of alignment</scene>, repressing their DNA binding ability (Figure 2). | ||
[[Image:2KJB + 2KJC side by side.png|600px|center|thumb| Figure 2:Comparison of CzrA with Zn<sup>+2</sup> bound and CzrA with DNA bound with the alpha five helices shown in red and the alpha four helices shown in green]] | [[Image:2KJB + 2KJC side by side.png|600px|center|thumb| Figure 2:Comparison of CzrA with Zn<sup>+2</sup> bound and CzrA with DNA bound with the alpha five helices shown in red and the alpha four helices shown in green]] | ||