Transaldolase: Difference between revisions

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<StructureSection load='3tno' size='400' side='right' scene='47/477090/Cv/1' caption='Transaldolase dimer complex with sedoheptulose 7-phosphate and Cl- (green) ion, [[3tno]]'>
<StructureSection load='3tno' size='400' side='right' scene='47/477090/Cv/1' caption='Transaldolase dimer complex with sedoheptulose 7-phosphate and Cl- (green) ion, [[3tno]]' pspeed='8'>


== Function ==
== Function ==
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{{Template:ColorKey_Strand}},
{{Template:ColorKey_Strand}},
{{Template:ColorKey_Loop}},
{{Template:ColorKey_Loop}},
{{Template:ColorKey_Turn}}). The <scene name='47/477090/Cv/5'>active site contains a Schiff-base-bound phosphosugar</scene> at <scene name='47/477090/Cv/6'>Lys135</scene><ref>PMID:24531488</ref>. Water molecules shown as red spheres.
{{Template:ColorKey_Turn}}). The <scene name='47/477090/Cv/5'>active site contains a Schiff-base-bound phosphosugar</scene> at <scene name='47/477090/Cv/6'>Lys135</scene><ref>PMID:24531488</ref>. Water molecules shown as red spheres. <scene name='47/477090/Cv/7'>Cl coordination site</scene>.
== 3D Structures of transaldolase ==
== 3D Structures of transaldolase ==



Revision as of 12:52, 2 April 2017


Function

Transaldolase (TAL) is part of the pentose phosphate pathway. It catalyzes the transformation of sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate to erythrose 4-phosphate and fructose 6-phosphate[1].

Disease

TAL deficiency influences mitochondrial homeostasis, Ca+2 fluxing and apoptosis[2].

Structural highlights

TAL overall structure is of a (Alpha Helices,

 Beta Strands ,  Loops , Turns). The at [3]. Water molecules shown as red spheres. .

3D Structures of transaldolase

Updated on 29-May-2025

{{#tree:id=OrganizedByTopic|openlevels=0|

  • Transaldolase
    • 3clm – TAL – Neisseria gonorrhoeae
    • 3cwn, 1onr, 1ucw - EcTAL B – Escherichia coli
    • 3kof, 1i2n, 1i2o, 1i2p, 1i2q, 1i2r, 4rz5, 4rz6 - EcTAL B (mutant)
    • 3hjz – TAL B – Prochlorococcus marinus
    • 3igx, 4e0c – FtTAL B – Francisella tularensis
    • 3m16 – TAL – Oleispira Antarctica
    • 3r8r – TAL – Bacillus subtilis
    • 3r5e – TAL – Corynebacterium glutamicum
    • 1f05 – TAL – human
    • 1vpx – TAL – Thermotoga maritima
    • 1wx0 – TAL – Thermus thermophilus
    • 2cwn, 2e1d – TAL (mutant) – mouse
  • Transaldolase binary complexes
    • 3tk7 - FtTAL B + fructose 6-phosphate
    • 3te9 - FtTAL B (mutant) + fructose 6-phosphate
    • 3tkf - FtTAL B (mutant) + seduheptulose 7-phosphate
    • 3tno - FtTAL B + seduheptulose 7-phosphate
    • 3upb - FtTAL B + arabinose 5-phosphate
    • 4s2b - EcTAL B + tagatose 6-phosphate
    • 4s2c, 4s1f - EcTAL B + fructose 6-phosphate
    • 4rxf, 4rxg, 4rz4 - EcTAL B (mutant) + fructose 6-phosphate
    • 4xz9 - TAL + glycerol 3-phosphate – Thermoplasma acidophilum

}}

Transaldolase dimer complex with sedoheptulose 7-phosphate and Cl- (green) ion, 3tno

Drag the structure with the mouse to rotate

ReferencesReferences

  1. Caillau M, Paul Quick W. New insights into plant transaldolase. Plant J. 2005 Jul;43(1):1-16. PMID:15960612 doi:http://dx.doi.org/TPJ2427
  2. Qian Y, Banerjee S, Grossman CE, Amidon W, Nagy G, Barcza M, Niland B, Karp DR, Middleton FA, Banki K, Perl A. Transaldolase deficiency influences the pentose phosphate pathway, mitochondrial homoeostasis and apoptosis signal processing. Biochem J. 2008 Oct 1;415(1):123-34. doi: 10.1042/BJ20080722. PMID:18498245 doi:http://dx.doi.org/10.1042/BJ20080722
  3. Light SH, Minasov G, Duban ME, Anderson WF. Adherence to Burgi-Dunitz stereochemical principles requires significant structural rearrangements in Schiff-base formation: insights from transaldolase complexes. Acta Crystallogr D Biol Crystallogr. 2014 Feb;70(Pt 2):544-52. doi:, 10.1107/S1399004713030666. Epub 2014 Jan 31. PMID:24531488 doi:http://dx.doi.org/10.1107/S1399004713030666

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