Sandbox Reserved 1069: Difference between revisions
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[[Image:Binding_site_A.fw.png|200px|left|thumb|Binding Site A showing TM2 domain (left) and TM5 domain (right). The Asp45 and Asp49 as well as the His153 and Asp157 are the coordination residues in the acitve site]] | [[Image:Binding_site_A.fw.png|200px|left|thumb|Binding Site A showing TM2 domain (left) and TM5 domain (right). The Asp45 and Asp49 as well as the His153 and Asp157 are the coordination residues in the acitve site]] | ||
It is important to note that the structure of this binding site is rigid because of the coordination of the Zn<sup>2+</sup> between the four residues. This rigidity is indicative that any slight shift on either of the helices will cause a drastic readjustment of the coordination of Zn<sup>2+</sup>. In addition, there are no outer-shell constraints to hold the residues in place, which means that with a readjustment of the molecule, there is no energy being expended to bind or release another Zn<sup>2+</sup> molecule. Therefore, the Zn<sup>2+</sup> is able to rapidly release and a new Zn<sup>2+</sup> can bind again with a simple reorientation or shift of the molecule. This rapid on off bind and release mechanism is the regulator of homeostatic levels of Zn<sup>2+</sup> in the cell | It is important to note that the structure of this binding site is rigid because of the coordination of the Zn<sup>2+</sup> between the four residues. This rigidity is indicative that any slight shift on either of the helices will cause a drastic readjustment of the coordination of Zn<sup>2+</sup>. In addition, there are no outer-shell constraints to hold the residues in place, which means that with a readjustment of the molecule, there is no energy being expended to bind or release another Zn<sup>2+</sup> molecule. Therefore, the Zn<sup>2+</sup> is able to rapidly release and a new Zn<sup>2+</sup> can bind again with a simple reorientation or shift of the molecule. This rapid on/off bind and release mechanism is the regulator of homeostatic levels of Zn<sup>2+</sup> in the cell, which is significantly faster than other Zn<sup>2+</sup> exchange rate proteins by several orders of magnitude. | ||
'''Binding Site C''' | '''Binding Site C''' |