5fze: Difference between revisions

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-'''Unreleased structure'''
-The entry 5fze is ON HOLD  until Paper Publication
+==Crystal structure of the catalytic domain of human JARID1B in complex with MC3960==
+<StructureSection load='5fze' size='340' side='right' caption='[[5fze]], [[Resolution|resolution]] 2.02&Aring;' scene=''>
-Authors: Nowak, R., Krojer, T., Johansson, C., Gileadi, C., Kupinska, K., Strain-Damerell, C., Szykowska, A., Von Delft, F., Burgess-Brown, N.A., Arrowsmith, C.H., Bountra, C., Edwards, A.M., Rotili, D., Mai, A., Oppermann, U.
+== Structural highlights ==
+<table><tr><td colspan='2'>[[5fze]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5FZE OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5FZE FirstGlance]. <br>
-Description: Crystal structure of the catalytic domain of human JARID1B in complex with MC3960
+</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=H0X:[(6-OXO-4-PHENYL-1,6-DIHYDROPYRIMIDIN-2-YL)SULFANYL]ACETONITRILE'>H0X</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-[[Category: Unreleased Structures]]
+<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5fyc|5fyc]], [[5fyh|5fyh]], [[5fyi|5fyi]], [[5fym|5fym]], [[5fys|5fys]], [[5fyt|5fyt]], [[5fyu|5fyu]], [[5fyv|5fyv]], [[5fyy|5fyy]], [[5fyz|5fyz]], [[5fz0|5fz0]], [[5fz1|5fz1]], [[5fz3|5fz3]], [[5fz4|5fz4]], [[5fz6|5fz6]], [[5fz7|5fz7]], [[5fz8|5fz8]], [[5fz9|5fz9]], [[5fza|5fza]], [[5fzb|5fzb]], [[5fzc|5fzc]], [[5fzd|5fzd]], [[5fzf|5fzf]], [[5fzg|5fzg]], [[5fzh|5fzh]], [[5fzi|5fzi]], [[5fzk|5fzk]], [[5fzl|5fzl]], [[5fzm|5fzm]], [[5fzo|5fzo]]</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5fze FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5fze OCA], [http://pdbe.org/5fze PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5fze RCSB], [http://www.ebi.ac.uk/pdbsum/5fze PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5fze ProSAT]</span></td></tr>
+</table>
+== Function ==
+[[http://www.uniprot.org/uniprot/KDM5B_HUMAN KDM5B_HUMAN]] Histone demethylase that demethylates 'Lys-4' of histone H3, thereby playing a central role in histone code. Does not demethylate histone H3 'Lys-9' or H3 'Lys-27'. Demethylates trimethylated, dimethylated and monomethylated H3 'Lys-4'. Acts as a transcriptional corepressor for FOXG1B and PAX9. Favors the proliferation of breast cancer cells by repressing tumor suppressor genes such as BRCA1 and HOXA5. In contrast, may act as a tumor suppressor for melanoma.<ref>PMID:12657635</ref> <ref>PMID:16645588</ref> <ref>PMID:17320161</ref> <ref>PMID:17363312</ref>
+== References ==
+<references/>
+__TOC__
+</StructureSection>
+[[Category: Arrowsmith, C H]]
+[[Category: Bountra, C]]
+[[Category: Burgess-Brown, N A]]
+[[Category: Delft, F Von]]
+[[Category: Edwards, A M]]
+[[Category: Gileadi, C]]
+[[Category: Johansson, C]]
+[[Category: Krojer, T]]
+[[Category: Kupinska, K]]
+[[Category: Mai, A]]
 [[Category: Nowak, R]]
-[[Category: Arrowsmith, C.H]]
-[[Category: Gileadi, C]]
 [[Category: Oppermann, U]]
 [[Category: Rotili, D]]
+[[Category: Strain-Damerell, C]]
 [[Category: Szykowska, A]]
-[[Category: Burgess-Brown, N.A]]
+[[Category: Jarid1b]]
-[[Category: Von Delft, F]]
+[[Category: Oxidoreductase]]
-[[Category: Edwards, A.M]]
+[[Category: Plu1]]
-[[Category: Johansson, C]]
-[[Category: Mai, A]]
-[[Category: Strain-Damerell, C]]
-[[Category: Krojer, T]]
-[[Category: Bountra, C]]
-[[Category: Kupinska, K]]