5ttk: Difference between revisions

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'''Unreleased structure'''


The entry 5ttk is ON HOLD  until Paper Publication
==Crystal Structure of Selenomethionine-incorporated Nicotine Oxidoreductase from Pseudomonas putida==
<StructureSection load='5ttk' size='340' side='right' caption='[[5ttk]], [[Resolution|resolution]] 2.51&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[5ttk]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5TTK OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5TTK FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene></td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5ttj|5ttj]]</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5ttk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ttk OCA], [http://pdbe.org/5ttk PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5ttk RCSB], [http://www.ebi.ac.uk/pdbsum/5ttk PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5ttk ProSAT]</span></td></tr>
</table>
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
The first structure of nicotine oxidoreductase (NicA2) was determined by X-ray crystallography. Pseudomonas putida has evolved nicotine-degrading activity to provide a source of carbon and nitrogen. The structure establishes NicA2 as a member of the monoamine oxidase family. Residues 1-50 are disordered and may play a role in localization. The nicotine-binding site proximal to the isoalloxazine ring of flavin shows an unusual composition of the classical aromatic cage (W427 and N462). The active site architecture is consistent with the proposed binding of the deprotonated form of the substrate and the flavin-dependent oxidation of the pyrrolidone C-N bond followed by nonenzymatic hydrolysis.


Authors: Tararina, M.A., Janda, K.D., Allen, K.N.
Structural Analysis Provides Mechanistic Insight into Nicotine Oxidoreductase from Pseudomonas putida.,Tararina MA, Janda KD, Allen KN Biochemistry. 2016 Dec 6;55(48):6595-6598. Epub 2016 Nov 18. PMID:27933790<ref>PMID:27933790</ref>


Description: Crystal Structure of Selenomethionine-incorporated Nicotine Oxidoreductase from Pseudomonas putida
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
[[Category: Unreleased Structures]]
</div>
[[Category: Janda, K.D]]
<div class="pdbe-citations 5ttk" style="background-color:#fffaf0;"></div>
[[Category: Tararina, M.A]]
== References ==
[[Category: Allen, K.N]]
<references/>
__TOC__
</StructureSection>
[[Category: Allen, K N]]
[[Category: Janda, K D]]
[[Category: Tararina, M A]]
[[Category: Flavoenzyme]]
[[Category: Monoamine oxidase family]]
[[Category: Nicotine degradation]]
[[Category: Oxidoreductase]]
[[Category: Phbh]]

Revision as of 02:25, 26 January 2017

Crystal Structure of Selenomethionine-incorporated Nicotine Oxidoreductase from Pseudomonas putidaCrystal Structure of Selenomethionine-incorporated Nicotine Oxidoreductase from Pseudomonas putida

Structural highlights

5ttk is a 4 chain structure. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:
NonStd Res:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Publication Abstract from PubMed

The first structure of nicotine oxidoreductase (NicA2) was determined by X-ray crystallography. Pseudomonas putida has evolved nicotine-degrading activity to provide a source of carbon and nitrogen. The structure establishes NicA2 as a member of the monoamine oxidase family. Residues 1-50 are disordered and may play a role in localization. The nicotine-binding site proximal to the isoalloxazine ring of flavin shows an unusual composition of the classical aromatic cage (W427 and N462). The active site architecture is consistent with the proposed binding of the deprotonated form of the substrate and the flavin-dependent oxidation of the pyrrolidone C-N bond followed by nonenzymatic hydrolysis.

Structural Analysis Provides Mechanistic Insight into Nicotine Oxidoreductase from Pseudomonas putida.,Tararina MA, Janda KD, Allen KN Biochemistry. 2016 Dec 6;55(48):6595-6598. Epub 2016 Nov 18. PMID:27933790[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

  1. Tararina MA, Janda KD, Allen KN. Structural Analysis Provides Mechanistic Insight into Nicotine Oxidoreductase from Pseudomonas putida. Biochemistry. 2016 Dec 6;55(48):6595-6598. Epub 2016 Nov 18. PMID:27933790 doi:http://dx.doi.org/10.1021/acs.biochem.6b00963

5ttk, resolution 2.51Å

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