3hdc: Difference between revisions

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==The crystal structure of thioredoxin protein from Geobacter metallireducens==
==The crystal structure of thioredoxin protein from Geobacter metallireducens==
<StructureSection load='3hdc' size='340' side='right' caption='[[3hdc]], [[Resolution|resolution]] 1.77&Aring;' scene=''>
<StructureSection load='3hdc' size='340' side='right' caption='[[3hdc]], [[Resolution|resolution]] 1.77&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3hdc]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Geobacter_metallireducens_gs-15 Geobacter metallireducens gs-15]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HDC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3HDC FirstGlance]. <br>
<table><tr><td colspan='2'>[[3hdc]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Geomg Geomg]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HDC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3HDC FirstGlance]. <br>
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Gmet_1383 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=269799 Geobacter metallireducens GS-15])</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Gmet_1383 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=269799 GEOMG])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3hdc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hdc OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3hdc RCSB], [http://www.ebi.ac.uk/pdbsum/3hdc PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/3hdc TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3hdc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hdc OCA], [http://pdbe.org/3hdc PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3hdc RCSB], [http://www.ebi.ac.uk/pdbsum/3hdc PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3hdc ProSAT], [http://www.topsan.org/Proteins/NYSGXRC/3hdc TOPSAN]</span></td></tr>
</table>
</table>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
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     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3hdc ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Geobacter metallireducens gs-15]]
[[Category: Geomg]]
[[Category: Burley, S K]]
[[Category: Burley, S K]]
[[Category: Structural genomic]]
[[Category: Structural genomic]]

Revision as of 22:13, 11 August 2016

The crystal structure of thioredoxin protein from Geobacter metallireducensThe crystal structure of thioredoxin protein from Geobacter metallireducens

Structural highlights

3hdc is a 1 chain structure with sequence from Geomg. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
NonStd Res:
Gene:Gmet_1383 (GEOMG)
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3hdc, resolution 1.77Å

Drag the structure with the mouse to rotate

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