4lno: Difference between revisions

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==B. subtilis glutamine synthetase structures reveal large active site conformational changes and basis for isoenzyme specific regulation: form two of GS-1==
==B. subtilis glutamine synthetase structures reveal large active site conformational changes and basis for isoenzyme specific regulation: form two of GS-1==
<StructureSection load='4lno' size='340' side='right' caption='[[4lno]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
<StructureSection load='4lno' size='340' side='right' caption='[[4lno]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">glnA, BSU17460 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1423 "Bacillus globigii" Migula 1900])</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">glnA, BSU17460 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1423 "Bacillus globigii" Migula 1900])</td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Glutamate--ammonia_ligase Glutamate--ammonia ligase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.3.1.2 6.3.1.2] </span></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Glutamate--ammonia_ligase Glutamate--ammonia ligase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.3.1.2 6.3.1.2] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4lno FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4lno OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4lno RCSB], [http://www.ebi.ac.uk/pdbsum/4lno PDBsum]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4lno FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4lno OCA], [http://pdbe.org/4lno PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4lno RCSB], [http://www.ebi.ac.uk/pdbsum/4lno PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4lno ProSAT]</span></td></tr>
</table>
</table>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
<div class="pdbe-citations 4lno" style="background-color:#fffaf0;"></div>
== References ==
== References ==
<references/>
<references/>

Revision as of 11:50, 11 August 2016

B. subtilis glutamine synthetase structures reveal large active site conformational changes and basis for isoenzyme specific regulation: form two of GS-1B. subtilis glutamine synthetase structures reveal large active site conformational changes and basis for isoenzyme specific regulation: form two of GS-1

Structural highlights

4lno is a 6 chain structure with sequence from "bacillus_globigii"_migula_1900 "bacillus globigii" migula 1900. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:,
Gene:glnA, BSU17460 ("Bacillus globigii" Migula 1900)
Activity:Glutamate--ammonia ligase, with EC number 6.3.1.2
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Publication Abstract from PubMed

Glutamine synthetase (GS), which catalyzes the production of glutamine (Q), plays essential roles in nitrogen metabolism. There are two main bacterial GS isoenzymes, GSI-alpha and GSI-beta. GSI-alpha enzymes, which have not been structurally characterized, are uniquely feedback inhibited by Q. To gain insight into GSI-alpha function, we performed biochemical and cellular studies and obtained structures for all GSI-alpha catalytic and regulatory states. GSI-alpha forms a massive 600 kDa dodecameric machine. Unlike other characterized GS, the B. subtilis enzyme undergoes dramatic intersubunit conformational alterations during formation of the transition state. Remarkably, these changes are required for active site construction. Feedback inhibition arises from a hydrogen-bond network between Q, the catalytic glutamate and GSI-alpha specific residue, Arg62, from an adjacent subunit. Notably, Arg62 must be ejected for proper active site reorganization. Consistent with these findings, a R62A mutation abrogates Q-feedback inhibition but does not affect catalysis. Thus, these data reveal a heretofore unseen restructuring of an enzyme active site that is coupled with an isoenzyme-specific regulatory mechanism. This GSI-alpha-specific regulatory network could be exploited for inhibitor design against Gram-positive pathogens.

Structures of the B. subtilis glutamine synthetase dodecamer reveal large intersubunit catalytic conformational changes linked to a unique feedback inhibition mechanism.,Murray DS, Chinnam N, Tonthat NK, Whitfill T, Wray LV, Fisher SH, Schumacher MA J Biol Chem. 2013 Oct 24. PMID:24158439[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

  1. Murray DS, Chinnam N, Tonthat NK, Whitfill T, Wray LV, Fisher SH, Schumacher MA. Structures of the B. subtilis glutamine synthetase dodecamer reveal large intersubunit catalytic conformational changes linked to a unique feedback inhibition mechanism. J Biol Chem. 2013 Oct 24. PMID:24158439 doi:http://dx.doi.org/10.1074/jbc.M113.519496

4lno, resolution 2.90Å

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