1m1d: Difference between revisions
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|PDB= 1m1d |SIZE=350|CAPTION= <scene name='initialview01'>1m1d</scene>, resolution 2.2Å | |PDB= 1m1d |SIZE=350|CAPTION= <scene name='initialview01'>1m1d</scene>, resolution 2.2Å | ||
|SITE= | |SITE= | ||
|LIGAND= | |LIGAND= <scene name='pdbligand=LYX:N''-(2-COENZYME+A)-PROPANOYL-LYSINE'>LYX</scene> | ||
|ACTIVITY= | |ACTIVITY= | ||
|GENE= | |GENE= | ||
|DOMAIN= | |||
|RELATEDENTRY=[[1qsn|1QSN]], [[1qsr|1QSR]], [[1qst|1QST]], [[1ygh|1YGH]], [[1cmo|1CMO]] | |||
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1m1d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1m1d OCA], [http://www.ebi.ac.uk/pdbsum/1m1d PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1m1d RCSB]</span> | |||
}} | }} | ||
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[[Category: transcription factor]] | [[Category: transcription factor]] | ||
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 22:10:03 2008'' | ||
Revision as of 22:10, 30 March 2008
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| , resolution 2.2Å | |||||||
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| Ligands: | |||||||
| Related: | 1QSN, 1QSR, 1QST, 1YGH, 1CMO
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| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||
TETRAHYMENA GCN5 WITH BOUND BISUBSTRATE ANALOG INHIBITOR
OverviewOverview
Histone acetyltransferases (HATs) use acetyl CoA to acetylate target lysine residues within histones and other transcription factors, such as the p53 tumor suppressor, to promote gene activation. HAT enzymes fall into subfamilies with divergence in sequence and substrate preference. Several HAT proteins have been implicated in human cancer. We have previously reported on the preparation of peptide-CoA conjugate inhibitors with distinct specificities for the p300/CBP [cAMP response element binding protein (CREB)-binding protein] or GCN5 HAT subfamilies. Here we report on the crystal structure of the GCN5 HAT bound to a peptide-CoA conjugate containing CoA covalently attached through an isopropionyl linker to Lys-14 of a 20-aa N-terminal fragment of histone H3. Surprisingly, the structure reveals that the H3 portion of the inhibitor is bound outside of the binding site for the histone substrate and that only five of the 20 aa residues of the inhibitor are ordered. Rearrangements within the C-terminal region of the GCN5 protein appear to mediate this peptide displacement. Mutational and enzymatic data support the hypothesis that the observed structure corresponds to a late catalytic intermediate. The structure also provides a structural scaffold for the design of HAT-specific inhibitors that may have therapeutic applications for the treatment of HAT-mediated cancers.
About this StructureAbout this Structure
1M1D is a Protein complex structure of sequences from Tetrahymena thermophila. Full crystallographic information is available from OCA.
ReferenceReference
Structure of the GCN5 histone acetyltransferase bound to a bisubstrate inhibitor., Poux AN, Cebrat M, Kim CM, Cole PA, Marmorstein R, Proc Natl Acad Sci U S A. 2002 Oct 29;99(22):14065-70. Epub 2002 Oct 21. PMID:12391296
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