4hjl: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
No edit summary
No edit summary
Line 1: Line 1:
==Naphthalene 1,2-Dioxygenase bound to 1-chloronaphthalene==
==Naphthalene 1,2-Dioxygenase bound to 1-chloronaphthalene==
<StructureSection load='4hjl' size='340' side='right' caption='[[4hjl]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
<StructureSection load='4hjl' size='340' side='right' caption='[[4hjl]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[4hjl]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_sp._c18 Pseudomonas sp. c18]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4HJL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4HJL FirstGlance]. <br>
<table><tr><td colspan='2'>[[4hjl]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseu8 Pseu8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4HJL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4HJL FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=15O:1-CHLORONAPHTHALENE'>15O</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=FES:FE2/S2+(INORGANIC)+CLUSTER'>FES</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=15O:1-CHLORONAPHTHALENE'>15O</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=FES:FE2/S2+(INORGANIC)+CLUSTER'>FES</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1ndo|1ndo]], [[1eg9|1eg9]], [[1o7g|1o7g]], [[1o7h|1o7h]], [[1o7m|1o7m]], [[1o7n|1o7n]], [[1o7p|1o7p]], [[1o7w|1o7w]], [[1uuv|1uuv]], [[1uuw|1uuw]], [[2hmj|2hmj]], [[2hmk|2hmk]], [[2hml|2hml]], [[2hmm|2hmm]], [[2hmn|2hmn]], [[2hmo|2hmo]]</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1ndo|1ndo]], [[1eg9|1eg9]], [[1o7g|1o7g]], [[1o7h|1o7h]], [[1o7m|1o7m]], [[1o7n|1o7n]], [[1o7p|1o7p]], [[1o7w|1o7w]], [[1uuv|1uuv]], [[1uuw|1uuw]], [[2hmj|2hmj]], [[2hmk|2hmk]], [[2hml|2hml]], [[2hmm|2hmm]], [[2hmn|2hmn]], [[2hmo|2hmo]]</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">doxB, NC_004999.1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=69011 Pseudomonas sp. C18]), doxD, NC_004999.1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=69011 Pseudomonas sp. C18])</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">doxB, NC_004999.1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=69011 PSEU8]), doxD, NC_004999.1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=69011 PSEU8])</td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Naphthalene_1,2-dioxygenase Naphthalene 1,2-dioxygenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.14.12.12 1.14.12.12] </span></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Naphthalene_1,2-dioxygenase Naphthalene 1,2-dioxygenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.14.12.12 1.14.12.12] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4hjl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4hjl OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4hjl RCSB], [http://www.ebi.ac.uk/pdbsum/4hjl PDBsum]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4hjl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4hjl OCA], [http://pdbe.org/4hjl PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4hjl RCSB], [http://www.ebi.ac.uk/pdbsum/4hjl PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4hjl ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
Line 17: Line 18:
</StructureSection>
</StructureSection>
[[Category: Naphthalene 1,2-dioxygenase]]
[[Category: Naphthalene 1,2-dioxygenase]]
[[Category: Pseudomonas sp. c18]]
[[Category: Pseu8]]
[[Category: Ferraro, D J]]
[[Category: Ferraro, D J]]
[[Category: Ramaswamy, S]]
[[Category: Ramaswamy, S]]
[[Category: Oxidoreductase-oxidoreductase inhibitor complex]]
[[Category: Oxidoreductase-oxidoreductase inhibitor complex]]

Revision as of 04:38, 5 August 2016

Naphthalene 1,2-Dioxygenase bound to 1-chloronaphthaleneNaphthalene 1,2-Dioxygenase bound to 1-chloronaphthalene

Structural highlights

4hjl is a 2 chain structure with sequence from Pseu8. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:, , , ,
Gene:doxB, NC_004999.1 (PSEU8), doxD, NC_004999.1 (PSEU8)
Activity:Naphthalene 1,2-dioxygenase, with EC number 1.14.12.12
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

[NDOB_PSEU8] Component of the naphthalene dioxygenase (NDO) multicomponent enzyme system which catalyzes the incorporation of both atoms of molecular oxygen into naphthalene to form cis-naphthalene dihydrodiol. [NDOC_PSEU8] Component of the naphthalene dioxygenase (NDO) multicomponent enzyme system which catalyzes the incorporation of both atoms of molecular oxygen into naphthalene to form cis-naphthalene dihydrodiol. The beta subunit may be responsible for the substrate specificity of the enzyme.

See Also

4hjl, resolution 1.50Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA