1llm: Difference between revisions
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|PDB= 1llm |SIZE=350|CAPTION= <scene name='initialview01'>1llm</scene>, resolution 1.50Å | |PDB= 1llm |SIZE=350|CAPTION= <scene name='initialview01'>1llm</scene>, resolution 1.50Å | ||
|SITE= | |SITE= | ||
|LIGAND= <scene name='pdbligand=ZN:ZINC ION'>ZN</scene> | |LIGAND= <scene name='pdbligand=DA:2'-DEOXYADENOSINE-5'-MONOPHOSPHATE'>DA</scene>, <scene name='pdbligand=DC:2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE'>DC</scene>, <scene name='pdbligand=DG:2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE'>DG</scene>, <scene name='pdbligand=DT:THYMIDINE-5'-MONOPHOSPHATE'>DT</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene> | ||
|ACTIVITY= | |ACTIVITY= | ||
|GENE= | |GENE= | ||
|DOMAIN= | |||
|RELATEDENTRY=[[1aay|1AAY]], [[1zaa|1ZAA]], [[1ysa|1YSA]], [[1g2d|1G2D]], [[1g2f|1G2F]] | |||
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1llm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1llm OCA], [http://www.ebi.ac.uk/pdbsum/1llm PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1llm RCSB]</span> | |||
}} | }} | ||
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[[Category: Pabo, C O.]] | [[Category: Pabo, C O.]] | ||
[[Category: Wolfe, S A.]] | [[Category: Wolfe, S A.]] | ||
[[Category: dimerization]] | [[Category: dimerization]] | ||
[[Category: dna recognition]] | [[Category: dna recognition]] | ||
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[[Category: zinc finger]] | [[Category: zinc finger]] | ||
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 22:04:17 2008'' | ||
Revision as of 22:04, 30 March 2008
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| , resolution 1.50Å | |||||||
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| Ligands: | , , , , | ||||||
| Related: | 1AAY, 1ZAA, 1YSA, 1G2D, 1G2F
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| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||
Crystal Structure of a Zif23-GCN4 Chimera Bound to DNA
OverviewOverview
Proteins that employ dimerization domains to bind cooperatively to DNA have a number of potential advantages over monomers with regards to gene regulation. Using a combination of structure-based design and phage display, a dimeric Cys(2)His(2) zinc finger protein has been created that binds cooperatively to DNA via an attached leucine zipper dimerization domain. This chimera, derived from components of Zif268 and GCN4, displayed excellent DNA-binding specificity, and we now report the 1.5 A resolution cocrystal structure of the Zif268-GCN4 homodimer bound to DNA. This structure shows how phage display has annealed the DNA binding and dimerization domains into a single functional unit. Moreover, this chimera provides a potential platform for the creation heterodimeric zinc finger proteins that can regulate a desired target gene through cooperative DNA recognition.
About this StructureAbout this Structure
1LLM is a Single protein structure of sequence from Mus musculus and saccharomyces cerevisiae. Full crystallographic information is available from OCA.
ReferenceReference
Structure of a designed dimeric zinc finger protein bound to DNA., Wolfe SA, Grant RA, Pabo CO, Biochemistry. 2003 Nov 25;42(46):13401-9. PMID:14621985
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