Purine repressor: Difference between revisions

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<StructureSection load='1qp4' size='350' side='right' caption='Structure of purine processor complex with DNA (green) and hypoxanthine (PDB entry [[1qp4]])' scene=''>
<StructureSection load='1wet' size='350' side='right' caption='Structure of E. coli purine processor complex with DNA (green) and guanine (PDB entry [[1wet]])' scene=''>
== Function ==
== Function ==
'''Purine repressor''' (PurR) is a member of the lac repressor family.  PurP binds DNA via a highly conserved helix-turn-helix at the N terminal (DBD).  PurP contains a co-repressor binding domain as well (CBD).  PurP binds to a 16-bp operator sequence and co-regulates genes which are involved in the biosynthesis of purine and pyrimidine nucleotides<ref>PMID:1971621</ref>.
'''Purine repressor''' (PurR) is a member of the lac repressor family.  PurP binds DNA via a highly conserved helix-turn-helix at the N terminal (DBD).  PurP contains a nucleotide co-repressor binding domain as well (CBD).  PurP binds to a 16-bp operator sequence and co-regulates genes which are involved in the biosynthesis of purine and pyrimidine nucleotides<ref>PMID:1971621</ref>.
 
== Structural highlights ==
The PurP guanine co-repressor binding site includes stacking interactions as well as hydrogen bonded ones.  The DNA binding domain contains a helix-turn-helix-loop-helix motif which interacts with the DNA major groove and a hinge helix binding to to the DNA minor groove.  Residue L53 interdigitates with the DNA central base pair<ref>PMID:9278422</ref>.
</StructureSection>
</StructureSection>


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Michal Harel, Alexander Berchansky, Joel L. Sussman