1jnd: Difference between revisions
No edit summary |
No edit summary |
||
| Line 4: | Line 4: | ||
|PDB= 1jnd |SIZE=350|CAPTION= <scene name='initialview01'>1jnd</scene>, resolution 1.3Å | |PDB= 1jnd |SIZE=350|CAPTION= <scene name='initialview01'>1jnd</scene>, resolution 1.3Å | ||
|SITE= | |SITE= | ||
|LIGAND= <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene> | |LIGAND= <scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene> | ||
|ACTIVITY= | |ACTIVITY= | ||
|GENE= | |GENE= | ||
|DOMAIN= | |||
|RELATEDENTRY= | |||
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1jnd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jnd OCA], [http://www.ebi.ac.uk/pdbsum/1jnd PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1jnd RCSB]</span> | |||
}} | }} | ||
| Line 26: | Line 29: | ||
[[Category: Tormo, J.]] | [[Category: Tormo, J.]] | ||
[[Category: Varela, P F.]] | [[Category: Varela, P F.]] | ||
[[Category: chitinase]] | [[Category: chitinase]] | ||
[[Category: growth factor]] | [[Category: growth factor]] | ||
| Line 34: | Line 36: | ||
[[Category: insulin receptor]] | [[Category: insulin receptor]] | ||
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 21:36:05 2008'' | ||
Revision as of 21:36, 30 March 2008
| |||||||
| , resolution 1.3Å | |||||||
|---|---|---|---|---|---|---|---|
| Ligands: | , , | ||||||
| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||
Crystal structure of imaginal disc growth factor-2
OverviewOverview
Imaginal disc growth factor-2 (IDGF-2) is a member of a recently described family of Drosophila melanogaster-soluble polypeptide growth factors that promote cell proliferation in imaginal discs. Although their precise mode of action has not been established, IDGFs cooperate with insulin in stimulating the growth of imaginal disc cells. We report the crystal structure of IDGF-2 at 1.3-A resolution. The structure shows the classical (betaalpha)(8) barrel-fold of family 18 glycosyl hydrolases, with an insertion of an alpha + beta domain similar to that of Serratia marcescens chitinases A and B. However, amino acid substitutions in the consensus catalytic sequence of chitinases give IDGF-2 a less negatively charged environment in its putative ligand-binding site and preclude the nucleophilic attack mechanism of chitin hydrolysis. Particularly important is the replacement of Glu by Gln at position 132, which has been shown to abolish enzymatic activity in chitinases. Nevertheless, a modest conservation of residues that participate in oligosaccharide recognition suggests that IDGF-2 could bind carbohydrates, assuming several conformational changes to open the partially occluded binding site. Thus, IDGFs may have evolved from chitinases to acquire new functions as growth factors, interacting with cell surface glycoproteins implicated in growth-promoting processes, such as the Drosophila insulin receptor.
About this StructureAbout this Structure
1JND is a Single protein structure of sequence from Drosophila melanogaster. Full crystallographic information is available from OCA.
ReferenceReference
Crystal structure of imaginal disc growth factor-2. A member of a new family of growth-promoting glycoproteins from Drosophila melanogaster., Varela PF, Llera AS, Mariuzza RA, Tormo J, J Biol Chem. 2002 Apr 12;277(15):13229-36. Epub 2002 Jan 30. PMID:11821393
Page seeded by OCA on Sun Mar 30 21:36:05 2008