Oligopeptide-binding protein: Difference between revisions

Michal Harel (talk | contribs)
No edit summary
Michal Harel (talk | contribs)
No edit summary
Line 1: Line 1:
{{STRUCTURE_1olc|  PDB=1olc  | SIZE=400| SCENE= |right|CAPTION=Oligopeptide-binding protein (grey) complex with tetrapeptide (green)  and UO2+2 ion [[1olc]] }}
{{STRUCTURE_1olc|  PDB=1olc  | SIZE=400| SCENE= |right|CAPTION=Oligopeptide-binding protein (grey) complex with tetrapeptide (green)  and UO2+2 ion [[1olc]] }}


<!--
'''Oligopeptide-binding protein''' (Opp) is a component of the  
Please use the "3D" button above this box to insert a Jmol applet (molecule) on this page.
oligopeptide permease which is an ABC-type transporter system.  Opp binds polypeptides up to pentapeptide in length with high affinity.  Opp is required for sporulation and competence.  Opp carries oligopeptides to the membrane-associated oligopeptide permease<ref>PMID:14618258</ref>.
Or use the four-green-boxes-button to insert scrollable text adjacent
to a Jmol applet. Check out the other buttons as well!
-->
'''Oligopeptide-binding protein''' (OBP) is a component of the  
oligopeptide permease which is an ABC-type transporter system.  OBP binds polypeptides up to pentapeptide in length with high affinity.  OBP is required for sporulation and competence.  OBP carries oligopeptides to the membrane-associated oligopeptide permease.


==3D structures of oligopeptide-binding protein==
==3D structures of oligopeptide-binding protein==
Line 16: Line 11:
*Oligopeptide-binding protein
*Oligopeptide-binding protein


**[[1rkm]] – StOBP – ''Salmonella typhimurium''<br />
**[[1rkm]] – StOpp – ''Salmonella typhimurium''<br />
**[[3fto]] - LlOBP – ''Lactococcus lactis''<br />
**[[3fto]] - LlOpp – ''Lactococcus lactis''<br />
**[[2wol]] - ScOBP – ''Streptomyces clavuligerus''<br />
**[[2wol]] - ScOpp – ''Streptomyces clavuligerus''<br />


*Oligopeptide-binding protein complex with polypeptide
*Oligopeptide-binding protein complex with polypeptide


**[[1ola]], [[1olc]] – StOBP + tetrapeptide<br />  
**[[1ola]], [[1olc]] – StOpp + tetrapeptide<br />  
**[[2olb]], [[1jet]], [[1jeu]], [[1jev]], [[1b1h]], [[1b3f]], [[1b3g]], [[1b3l]], [[1b32]], [[1b40]], [[1b46]], [[1b4z]], [[1b5i]], [[1b5j]], [[1b51]], [[1b52]], [[1b58]], [[1b9j]], [[1b0h]], [[1b05]], [[1qka]], [[1qkb]] - StOBP + tripeptide<br />
**[[2olb]], [[1jet]], [[1jeu]], [[1jev]], [[1b1h]], [[1b3f]], [[1b3g]], [[1b3l]], [[1b32]], [[1b40]], [[1b46]], [[1b4z]], [[1b5i]], [[1b5j]], [[1b51]], [[1b52]], [[1b58]], [[1b9j]], [[1b0h]], [[1b05]], [[1qka]], [[1qkb]] - StOpp + tripeptide<br />
**[[2rkm]] - StOBP + dipeptide<br />
**[[2rkm]] - StOpp + dipeptide<br />
**[[1b4h]] - StOBP + Lys-DAB-Lys<br />
**[[1b4h]] - StOpp + Lys-DAB-Lys<br />
**[[1b5h]] - StOBP + Lys-DPP-Lys<br />
**[[1b5h]] - StOpp + Lys-DPP-Lys<br />
**[[1b6h]] - StOBP + Lys-NVA-Lys<br />
**[[1b6h]] - StOpp + Lys-NVA-Lys<br />
**[[1b7h]] - StOBP + Lys-NLE-Lys<br />
**[[1b7h]] - StOpp + Lys-NLE-Lys<br />
**[[1b2h]] - StOBP + Lys-ORN-Lys<br />
**[[1b2h]] - StOpp + Lys-ORN-Lys<br />
**[[1b1h]] - StOBP + Lys-HPE-Lys<br />
**[[1b1h]] - StOpp + Lys-HPE-Lys<br />
**[[1b3h]] - StOBP + Lys-ALC-Lys<br />
**[[1b3h]] - StOBpp+ Lys-ALC-Lys<br />
**[[2z23]] - OBP + tripeptide – ''Yersinia pestis''<br />
**[[2z23]] - Opp + tripeptide – ''Yersinia pestis''<br />
**[[3drf]], [[3dri]] - LlOBP + octapeptide<br />  
**[[3drf]], [[3dri]] - LlOpp + octapeptide<br />  
**[[3rya]], [[3ryb]] - LlOBP + nonapeptide<br />  
**[[3rya]], [[3ryb]] - LlOpp + nonapeptide<br />  
**[[3drg]] - LlOBP + bradykinin peptide<br />
**[[3drg]] - LlOpp + bradykinin peptide<br />
**[[3drh]] - LlOBP + hexapeptide<br />
**[[3drh]] - LlOpp + hexapeptide<br />
**[[3drj]] - LlOBP + PTH-related peptide<br />
**[[3drj]] - LlOpp + PTH-related peptide<br />
**[[3drk]] - LlOBP + neuropeptide S<br />
**[[3drk]] - LlOpp + neuropeptide S<br />
**[[2wok]] - ScOBP + bradykinin peptide <br />
**[[2wok]] - ScOpp + bradykinin peptide <br />
**[[2wop]] - ScOBP + arginine<br />
**[[2wop]] - ScOpp + arginine<br />
}}
}}
== References ==
<references/>
[[Category:Topic Page]]
[[Category:Topic Page]]

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Alexander Berchansky, Joel L. Sussman