5ee3: Difference between revisions

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'''Unreleased structure'''


The entry 5ee3 is ON HOLD  until Paper Publication
==COMPLEX STRUCTURE OF OSYCHF1 WITH AMP-PNP==
 
<StructureSection load='5ee3' size='340' side='right' caption='[[5ee3]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
Authors: Li, X., Chen, Z.
== Structural highlights ==
 
<table><tr><td colspan='2'>[[5ee3]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5EE3 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5EE3 FirstGlance]. <br>
Description: COMPLEX STRUCTURE OF OSYCHF1 WITH AMP-PNP
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ANP:PHOSPHOAMINOPHOSPHONIC+ACID-ADENYLATE+ESTER'>ANP</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
[[Category: Unreleased Structures]]
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5ee0|5ee0]], [[5ee1|5ee1]], [[5ee9|5ee9]]</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5ee3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ee3 OCA], [http://pdbe.org/5ee3 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5ee3 RCSB], [http://www.ebi.ac.uk/pdbsum/5ee3 PDBsum]</span></td></tr>
</table>
== Function ==
[[http://www.uniprot.org/uniprot/OLA1_ORYSJ OLA1_ORYSJ]] Hydrolyzes ATP, and can also hydrolyze GTP with lower efficiency. Has lower affinity for GTP (Potential). Exhibits GTPase activity (PubMed:19086295). Confers sensitivity to salinity stress by suppressing the anti-oxidation enzymatic activities and increasing lipid peroxidation thus leading to the accumulation of reactive oxygen species (ROS) (PubMed:23550829).[HAMAP-Rule:MF_03167]<ref>PMID:19086295</ref> <ref>PMID:23550829</ref> 
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Chen, Z]]
[[Category: Chen, Z]]
[[Category: Li, X]]
[[Category: Li, X]]
[[Category: Amp-pnp]]
[[Category: Atp]]
[[Category: Gtp-binding protein]]
[[Category: Hydrolase]]
[[Category: Osychf1]]
[[Category: P-loop ntpase]]
[[Category: Ychf-type]]

Revision as of 21:19, 26 February 2016

COMPLEX STRUCTURE OF OSYCHF1 WITH AMP-PNPCOMPLEX STRUCTURE OF OSYCHF1 WITH AMP-PNP

Structural highlights

5ee3 is a 2 chain structure. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:, , , ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum

Function

[OLA1_ORYSJ] Hydrolyzes ATP, and can also hydrolyze GTP with lower efficiency. Has lower affinity for GTP (Potential). Exhibits GTPase activity (PubMed:19086295). Confers sensitivity to salinity stress by suppressing the anti-oxidation enzymatic activities and increasing lipid peroxidation thus leading to the accumulation of reactive oxygen species (ROS) (PubMed:23550829).[HAMAP-Rule:MF_03167][1] [2]

References

  1. ↑ Cheung MY, Zeng NY, Tong SW, Li WY, Xue Y, Zhao KJ, Wang C, Zhang Q, Fu Y, Sun Z, Sun SS, Lam HM. Constitutive expression of a rice GTPase-activating protein induces defense responses. New Phytol. 2008 Jul;179(2):530-45. PMID:19086295
  2. ↑ Cheung MY, Li MW, Yung YL, Wen CQ, Lam HM. The unconventional P-loop NTPase OsYchF1 and its regulator OsGAP1 play opposite roles in salinity stress tolerance. Plant Cell Environ. 2013 Nov;36(11):2008-20. doi: 10.1111/pce.12108. Epub 2013, Apr 25. PMID:23550829 doi:http://dx.doi.org/10.1111/pce.12108

5ee3, resolution 2.90Å

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