3bru: Difference between revisions

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<StructureSection load='3bru' size='340' side='right' caption='[[3bru]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
<StructureSection load='3bru' size='340' side='right' caption='[[3bru]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3bru]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhodobacter_sphaeroides_2.4.1 Rhodobacter sphaeroides 2.4.1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BRU OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3BRU FirstGlance]. <br>
<table><tr><td colspan='2'>[[3bru]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhos4 Rhos4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BRU OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3BRU FirstGlance]. <br>
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RSP_1435, RHOS4_00080 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272943 Rhodobacter sphaeroides 2.4.1])</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RSP_1435, RHOS4_00080 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272943 RHOS4])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3bru FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bru OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3bru RCSB], [http://www.ebi.ac.uk/pdbsum/3bru PDBsum], [http://www.topsan.org/Proteins/MCSG/3bru TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3bru FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bru OCA], [http://pdbe.org/3bru PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3bru RCSB], [http://www.ebi.ac.uk/pdbsum/3bru PDBsum], [http://www.topsan.org/Proteins/MCSG/3bru TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/Q3J6K8_RHOS4 Q3J6K8_RHOS4]] A transcriptional repressor for its operon. Probably binds to 2 operator sequences in the promoter.  
[[http://www.uniprot.org/uniprot/ACUR_RHOS4 ACUR_RHOS4]] A transcriptional repressor for its operon. Probably binds to 2 operator sequences in the promoter.<ref>PMID:21249136</ref> 
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3bru ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
== References ==
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Rhodobacter sphaeroides 2 4.1]]
[[Category: Rhos4]]
[[Category: Freeman, L]]
[[Category: Freeman, L]]
[[Category: Joachimiak, A]]
[[Category: Joachimiak, A]]

Revision as of 14:05, 8 February 2016

Crystal structure of regulatory protein TetR from Rhodobacter sphaeroidesCrystal structure of regulatory protein TetR from Rhodobacter sphaeroides

Structural highlights

3bru is a 2 chain structure with sequence from Rhos4. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
NonStd Res:
Gene:RSP_1435, RHOS4_00080 (RHOS4)
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, TOPSAN

Function

[ACUR_RHOS4] A transcriptional repressor for its operon. Probably binds to 2 operator sequences in the promoter.[1]

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

References

  1. ↑ Sullivan MJ, Curson AR, Shearer N, Todd JD, Green RT, Johnston AW. Unusual regulation of a leaderless operon involved in the catabolism of dimethylsulfoniopropionate in Rhodobacter sphaeroides. PLoS One. 2011 Jan 7;6(1):e15972. doi: 10.1371/journal.pone.0015972. PMID:21249136 doi:http://dx.doi.org/10.1371/journal.pone.0015972

3bru, resolution 2.30Å

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