Circadian clock protein: Difference between revisions

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<StructureSection load='1r8j' size='350' side='right' caption='Circadian clock protein KaiA (PDB entry [[1r8j]])' scene=''>
<StructureSection load='1r8j' size='350' side='right' caption='Circadian clock protein KaiA (PDB entry [[1r8j]])' scene='53/536683/Cv/1'>


'''Circadian clock proteins''' measure out the 24 hour circadian rhythm.  In cyanobacteria protein KaiA<ref>PMID:15007067</ref> stimulates KaiC<ref>PMID:15304218</ref> which adds phosphate groups to itself.  Then KaiC binds to KaiB<ref>PMID:15716247</ref> which inactivates KaiA and causes the number of phosphate groups on KaiC to drop slowly.  KaiB disconnects allowing KaiA to start the cycle again.<ref>PMID:11687489</ref>  For details of KaiC see [[Circadian Clock Protein KaiC]].
'''Circadian clock proteins''' measure out the 24 hour circadian rhythm.  In cyanobacteria protein KaiA<ref>PMID:15007067</ref> stimulates KaiC<ref>PMID:15304218</ref> which adds phosphate groups to itself.  Then KaiC binds to KaiB<ref>PMID:15716247</ref> which inactivates KaiA and causes the number of phosphate groups on KaiC to drop slowly.  KaiB disconnects allowing KaiA to start the cycle again.<ref>PMID:11687489</ref>  For details of KaiC see [[Circadian Clock Protein KaiC]].
Circadian clock protein KaiA from [[Synechococcus elongatus]] is <scene name='53/536683/Cv/2'>homodimer</scene> (PDB entry [[1r8j]]).<ref>PMID:15007067</ref>
</StructureSection>
</StructureSection>
== 3D Structures of circadian clock protein ==
== 3D Structures of circadian clock protein ==

Revision as of 16:58, 27 January 2016


Circadian clock proteins measure out the 24 hour circadian rhythm. In cyanobacteria protein KaiA[1] stimulates KaiC[2] which adds phosphate groups to itself. Then KaiC binds to KaiB[3] which inactivates KaiA and causes the number of phosphate groups on KaiC to drop slowly. KaiB disconnects allowing KaiA to start the cycle again.[4] For details of KaiC see Circadian Clock Protein KaiC.

Circadian clock protein KaiA from Synechococcus elongatus is (PDB entry 1r8j).[5]

Circadian clock protein KaiA (PDB entry 1r8j)

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3D Structures of circadian clock protein3D Structures of circadian clock protein

Updated on 27-January-2016

ReferencesReferences

  1. Ye S, Vakonakis I, Ioerger TR, LiWang AC, Sacchettini JC. Crystal structure of circadian clock protein KaiA from Synechococcus elongatus. J Biol Chem. 2004 May 7;279(19):20511-8. Epub 2004 Mar 8. PMID:15007067 doi:10.1074/jbc.M400077200
  2. Pattanayek R, Wang J, Mori T, Xu Y, Johnson CH, Egli M. Visualizing a circadian clock protein: crystal structure of KaiC and functional insights. Mol Cell. 2004 Aug 13;15(3):375-88. PMID:15304218 doi:10.1016/j.molcel.2004.07.013
  3. . PMID:15716247
  4. Harmer SL, Panda S, Kay SA. Molecular bases of circadian rhythms. Annu Rev Cell Dev Biol. 2001;17:215-53. PMID:11687489 doi:http://dx.doi.org/10.1146/annurev.cellbio.17.1.215
  5. Ye S, Vakonakis I, Ioerger TR, LiWang AC, Sacchettini JC. Crystal structure of circadian clock protein KaiA from Synechococcus elongatus. J Biol Chem. 2004 May 7;279(19):20511-8. Epub 2004 Mar 8. PMID:15007067 doi:10.1074/jbc.M400077200

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Michal Harel, Alexander Berchansky, Joel L. Sussman