5bno: Difference between revisions

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'''Unreleased structure'''
==Crystal structure of human enterovirus D68 in complex with 6'SLN==
<StructureSection load='5bno' size='340' side='right' caption='[[5bno]], [[Resolution|resolution]] 2.15&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[5bno]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Enterovirus_d68 Enterovirus d68]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5BNO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5BNO FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=4U1:(6R)-5-(ACETYLAMINO)-3,5-DIDEOXY-6-[(1R,2R)-1,2,3-TRIHYDROXYPROPYL]-BETA-L-THREO-HEX-2-ULOPYRANONOSYL-(2- 6)-BETA-D-GALACTOPYRANOSYL-(1- 4)-2-(ACETYLAMINO)-2-DEOXY-BETA-D-GLUCOPYRANOSE'>4U1</scene></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5bnn|5bnn]], [[5bnp|5bnp]]</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5bno FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5bno OCA], [http://pdbe.org/5bno PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5bno RCSB], [http://www.ebi.ac.uk/pdbsum/5bno PDBsum]</span></td></tr>
</table>
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
Human enterovirus D68 (EV-D68) is a causative agent of childhood respiratory diseases and has now emerged as a global public health threat. Nevertheless, knowledge of the tissue tropism and pathogenesis of EV-D68 has been hindered by a lack of studies on the receptor-mediated EV-D68 entry into host cells. Here we demonstrate that cell surface sialic acid is essential for EV-D68 to bind to and infect susceptible cells. Crystal structures of EV-D68 in complex with sialylated glycan receptor analogues show that they bind into the 'canyon' on the virus surface. The sialic acid receptor induces a cascade of conformational changes in the virus to eject a fatty-acid-like molecule that regulates the stability of the virus. Thus, virus binding to a sialic acid receptor and to immunoglobulin-like receptors used by most other enteroviruses share a conserved mechanism for priming viral uncoating and facilitating cell entry.


The entry 5bno is ON HOLD  until Paper Publication
Sialic acid-dependent cell entry of human enterovirus D68.,Liu Y, Sheng J, Baggen J, Meng G, Xiao C, Thibaut HJ, van Kuppeveld FJ, Rossmann MG Nat Commun. 2015 Nov 13;6:8865. doi: 10.1038/ncomms9865. PMID:26563423<ref>PMID:26563423</ref>


Authors: Liu, Y., Sheng, J., Meng, G., Xiao, C., Rossmann, M.G.
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 
</div>
Description:  
<div class="pdbe-citations 5bno" style="background-color:#fffaf0;"></div>
[[Category: Unreleased Structures]]
== References ==
[[Category: Xiao, C]]
<references/>
__TOC__
</StructureSection>
[[Category: Enterovirus d68]]
[[Category: Liu, Y]]
[[Category: Liu, Y]]
[[Category: Meng, G]]
[[Category: Meng, G]]
[[Category: Rossmann, M.G]]
[[Category: Rossmann, M G]]
[[Category: Sheng, J]]
[[Category: Sheng, J]]
[[Category: Xiao, C]]
[[Category: Beta jelly roll]]
[[Category: Capsid]]
[[Category: Enterovirus]]
[[Category: Receptor]]
[[Category: Virus]]

Revision as of 22:22, 30 November 2015

Crystal structure of human enterovirus D68 in complex with 6'SLNCrystal structure of human enterovirus D68 in complex with 6'SLN

Structural highlights

5bno is a 4 chain structure with sequence from Enterovirus d68. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum

Publication Abstract from PubMed

Human enterovirus D68 (EV-D68) is a causative agent of childhood respiratory diseases and has now emerged as a global public health threat. Nevertheless, knowledge of the tissue tropism and pathogenesis of EV-D68 has been hindered by a lack of studies on the receptor-mediated EV-D68 entry into host cells. Here we demonstrate that cell surface sialic acid is essential for EV-D68 to bind to and infect susceptible cells. Crystal structures of EV-D68 in complex with sialylated glycan receptor analogues show that they bind into the 'canyon' on the virus surface. The sialic acid receptor induces a cascade of conformational changes in the virus to eject a fatty-acid-like molecule that regulates the stability of the virus. Thus, virus binding to a sialic acid receptor and to immunoglobulin-like receptors used by most other enteroviruses share a conserved mechanism for priming viral uncoating and facilitating cell entry.

Sialic acid-dependent cell entry of human enterovirus D68.,Liu Y, Sheng J, Baggen J, Meng G, Xiao C, Thibaut HJ, van Kuppeveld FJ, Rossmann MG Nat Commun. 2015 Nov 13;6:8865. doi: 10.1038/ncomms9865. PMID:26563423[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

  1. Liu Y, Sheng J, Baggen J, Meng G, Xiao C, Thibaut HJ, van Kuppeveld FJ, Rossmann MG. Sialic acid-dependent cell entry of human enterovirus D68. Nat Commun. 2015 Nov 13;6:8865. doi: 10.1038/ncomms9865. PMID:26563423 doi:http://dx.doi.org/10.1038/ncomms9865

5bno, resolution 2.15Å

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