5aef: Difference between revisions

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</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5aef FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5aef OCA], [http://pdbe.org/5aef PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5aef RCSB], [http://www.ebi.ac.uk/pdbsum/5aef PDBsum]</span></td></tr>
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5aef FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5aef OCA], [http://pdbe.org/5aef PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5aef RCSB], [http://www.ebi.ac.uk/pdbsum/5aef PDBsum]</span></td></tr>
</table>
</table>
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
Alzheimer's disease (AD) is a fatal neurodegenerative disorder in humans and the main cause of dementia in aging societies. The disease is characterized by the aberrant formation of beta-amyloid (Abeta) peptide oligomers and fibrils. These structures may damage the brain and give rise to cerebral amyloid angiopathy, neuronal dysfunction, and cellular toxicity. Although the connection between AD and Abeta fibrillation is extensively documented, much is still unknown about the formation of these Abeta aggregates and their structures at the molecular level. Here, we combined electron cryomicroscopy, 3D reconstruction, and integrative structural modeling methods to determine the molecular architecture of a fibril formed by Abeta(1-42), a particularly pathogenic variant of Abeta peptide. Our model reveals that the individual layers of the Abeta fibril are formed by peptide dimers with face-to-face packing. The two peptides forming the dimer possess identical tilde-shaped conformations and interact with each other by packing of their hydrophobic C-terminal beta-strands. The peptide C termini are located close to the main fibril axis, where they produce a hydrophobic core and are surrounded by the structurally more flexible and charged segments of the peptide N termini. The observed molecular architecture is compatible with the general chemical properties of Abeta peptide and provides a structural basis for various biological observations that illuminate the molecular underpinnings of AD. Moreover, the structure provides direct evidence for a steric zipper within a fibril formed by full-length Abeta peptide.
Peptide dimer structure in an Abeta(1-42) fibril visualized with cryo-EM.,Schmidt M, Rohou A, Lasker K, Yadav JK, Schiene-Fischer C, Fandrich M, Grigorieff N Proc Natl Acad Sci U S A. 2015 Sep 22;112(38):11858-63. doi:, 10.1073/pnas.1503455112. Epub 2015 Sep 8. PMID:26351699<ref>PMID:26351699</ref>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
<div class="pdbe-citations 5aef" style="background-color:#fffaf0;"></div>
== References ==
<references/>
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Revision as of 02:38, 22 October 2015

Electron cryo-microscopy of an Abeta(1-42)amyloid fibrilElectron cryo-microscopy of an Abeta(1-42)amyloid fibril

Structural highlights

5aef is a 2 chain structure. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum

Publication Abstract from PubMed

Alzheimer's disease (AD) is a fatal neurodegenerative disorder in humans and the main cause of dementia in aging societies. The disease is characterized by the aberrant formation of beta-amyloid (Abeta) peptide oligomers and fibrils. These structures may damage the brain and give rise to cerebral amyloid angiopathy, neuronal dysfunction, and cellular toxicity. Although the connection between AD and Abeta fibrillation is extensively documented, much is still unknown about the formation of these Abeta aggregates and their structures at the molecular level. Here, we combined electron cryomicroscopy, 3D reconstruction, and integrative structural modeling methods to determine the molecular architecture of a fibril formed by Abeta(1-42), a particularly pathogenic variant of Abeta peptide. Our model reveals that the individual layers of the Abeta fibril are formed by peptide dimers with face-to-face packing. The two peptides forming the dimer possess identical tilde-shaped conformations and interact with each other by packing of their hydrophobic C-terminal beta-strands. The peptide C termini are located close to the main fibril axis, where they produce a hydrophobic core and are surrounded by the structurally more flexible and charged segments of the peptide N termini. The observed molecular architecture is compatible with the general chemical properties of Abeta peptide and provides a structural basis for various biological observations that illuminate the molecular underpinnings of AD. Moreover, the structure provides direct evidence for a steric zipper within a fibril formed by full-length Abeta peptide.

Peptide dimer structure in an Abeta(1-42) fibril visualized with cryo-EM.,Schmidt M, Rohou A, Lasker K, Yadav JK, Schiene-Fischer C, Fandrich M, Grigorieff N Proc Natl Acad Sci U S A. 2015 Sep 22;112(38):11858-63. doi:, 10.1073/pnas.1503455112. Epub 2015 Sep 8. PMID:26351699[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

  1. Schmidt M, Rohou A, Lasker K, Yadav JK, Schiene-Fischer C, Fandrich M, Grigorieff N. Peptide dimer structure in an Abeta(1-42) fibril visualized with cryo-EM. Proc Natl Acad Sci U S A. 2015 Sep 22;112(38):11858-63. doi:, 10.1073/pnas.1503455112. Epub 2015 Sep 8. PMID:26351699 doi:http://dx.doi.org/10.1073/pnas.1503455112

5aef, resolution 5.00Å

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