NADP-dependent malic enzyme: Difference between revisions
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== In structures == | == In structures == | ||
Lysozyme is found in 595 PDB entries<br> | Lysozyme is found in 595 PDB entries<br> | ||
<br>Eukaryota (16 PDB entries): <br><br><b>Homo sapiens</b> (1 PDB entries): <br> | {{#tree:id=OrganizedByTopic|openlevels=0|<br>*Eukaryota (16 PDB entries): <br><br><b>**Homo sapiens</b> (1 PDB entries): <br> | ||
[[4uis]] <div class="pdb-prints 4uis"></div><br><br>Title: The cryoEM structure of human gamma-Secretase complex<br> | ***[[4uis]] <div class="pdb-prints 4uis"></div><br><br>Title: The cryoEM structure of human gamma-Secretase complex<br> | ||
Experimental EM map [http://pdbe.org/emd-2974 emd-2974]. <br> | Experimental EM map [http://pdbe.org/emd-2974 emd-2974]. <br> | ||
4.4 A resolution <br> | 4.4 A resolution <br> | ||
Other macromolecules also in this entry: GAMMA-SECRETASE, Nicastrin, Presenilin-1 NTF subunit, . <br><br> | Other macromolecules also in this entry: GAMMA-SECRETASE, Nicastrin, Presenilin-1 NTF subunit, . <br><br> | ||
<br><b>Hevea brasiliensis</b> (7 PDB entries): <br> | <br><b>**Hevea brasiliensis</b> (7 PDB entries): <br> | ||
[[1kqy]] <div class="pdb-prints 1kqy"></div><br><br>Title: Hevamine Mutant D125A/E127A/Y183F in Complex with Penta-NAG<br> | ***[[1kqy]] <div class="pdb-prints 1kqy"></div><br><br>Title: Hevamine Mutant D125A/E127A/Y183F in Complex with Penta-NAG<br> | ||
1.92 A resolution <br> | 1.92 A resolution <br> | ||
<br> | <br> | ||
[http://www.ebi.ac.uk/pdbe/entry/search/index?organism_scientific:"Hevea brasiliensis"&molecule_name:"Lysozyme" Search for other PDB entries]<br><b>Meretrix lusoria</b> (3 PDB entries): <br> | [http://www.ebi.ac.uk/pdbe/entry/search/index?organism_scientific:"Hevea brasiliensis"&molecule_name:"Lysozyme" Search for other PDB entries]<br><b>**Meretrix lusoria</b> (3 PDB entries): <br> | ||
[[4pj2]] <div class="pdb-prints 4pj2"></div><br><br>Title: Crystal structure of Aeromonas hydrophila PliI in complex with Meretrix lusoria lysozyme<br> | ***[[4pj2]] <div class="pdb-prints 4pj2"></div><br><br>Title: Crystal structure of Aeromonas hydrophila PliI in complex with Meretrix lusoria lysozyme<br> | ||
1.24 A resolution <br> | 1.24 A resolution <br> | ||
Other macromolecules also in this entry: Putative exported protein, . <br><br> | Other macromolecules also in this entry: Putative exported protein, . <br><br> | ||
[http://www.ebi.ac.uk/pdbe/entry/search/index?organism_scientific:"Meretrix lusoria"&molecule_name:"Lysozyme" Search for other PDB entries]<br><b>Antheraea mylitta</b> (1 PDB entries): <br> | [http://www.ebi.ac.uk/pdbe/entry/search/index?organism_scientific:"Meretrix lusoria"&molecule_name:"Lysozyme" Search for other PDB entries]<br><b>**Antheraea mylitta</b> (1 PDB entries): <br> | ||
[[1iiz]] <div class="pdb-prints 1iiz"></div><br><br>Title: Crystal Structure of the Induced Antibacterial Protein from Tasar Silkworm, Antheraea mylitta<br> | ***[[1iiz]] <div class="pdb-prints 1iiz"></div><br><br>Title: Crystal Structure of the Induced Antibacterial Protein from Tasar Silkworm, Antheraea mylitta<br> | ||
2.4 A resolution <br> | 2.4 A resolution <br> | ||
<br> | <br> | ||
<br><b>Ruditapes philippinarum</b> (1 PDB entries): <br> | <br><b>**Ruditapes philippinarum</b> (1 PDB entries): <br> | ||
[[2dqa]] <div class="pdb-prints 2dqa"></div><br><br>Title: Crystal Structure of Tapes japonica Lysozyme<br> | ***[[2dqa]] <div class="pdb-prints 2dqa"></div><br><br>Title: Crystal Structure of Tapes japonica Lysozyme<br> | ||
1.6 A resolution <br> | 1.6 A resolution <br> | ||
<br> | <br> | ||
<br><b>Mus musculus</b> (1 PDB entries): <br> | <br><b>**Mus musculus</b> (1 PDB entries): <br> | ||
[[1iak]] <div class="pdb-prints 1iak"></div><br><br>Title: HISTOCOMPATIBILITY ANTIGEN I-AK<br> | ***[[1iak]] <div class="pdb-prints 1iak"></div><br><br>Title: HISTOCOMPATIBILITY ANTIGEN I-AK<br> | ||
1.9 A resolution <br> | 1.9 A resolution <br> | ||
Other macromolecules also in this entry: H-2 class II histocompatibility antigen, A-K beta chain, H-2 class II histocompatibility antigen, A-K alpha chain. <br><br> | Other macromolecules also in this entry: H-2 class II histocompatibility antigen, A-K beta chain, H-2 class II histocompatibility antigen, A-K alpha chain. <br><br> | ||
<br><b>Bombyx mori</b> (2 PDB entries): <br> | <br><b>**Bombyx mori</b> (2 PDB entries): <br> | ||
[[1gd6]] <div class="pdb-prints 1gd6"></div><br><br>Title: STRUCTURE OF THE BOMBYX MORI LYSOZYME<br> | ***[[1gd6]] <div class="pdb-prints 1gd6"></div><br><br>Title: STRUCTURE OF THE BOMBYX MORI LYSOZYME<br> | ||
2.5 A resolution <br> | 2.5 A resolution <br> | ||
<br> | <br> | ||
[http://www.ebi.ac.uk/pdbe/entry/search/index?organism_scientific:"Bombyx mori"&molecule_name:"Lysozyme" Search for other PDB entries]<br>Viruses (578 PDB entries): <br><br><b>Enterobacteria phage P22</b> (2 PDB entries): <br> | [http://www.ebi.ac.uk/pdbe/entry/search/index?organism_scientific:"Bombyx mori"&molecule_name:"Lysozyme" Search for other PDB entries]<br>*Viruses (578 PDB entries): <br><br><b>**Enterobacteria phage P22</b> (2 PDB entries): <br> | ||
[[2anv]] <div class="pdb-prints 2anv"></div><br><br>Title: crystal structure of P22 lysozyme mutant L86M<br> | ***[[2anv]] <div class="pdb-prints 2anv"></div><br><br>Title: crystal structure of P22 lysozyme mutant L86M<br> | ||
1.04 A resolution <br> | 1.04 A resolution <br> | ||
<br> | <br> | ||
[http://www.ebi.ac.uk/pdbe/entry/search/index?organism_scientific:"Enterobacteria phage P22"&molecule_name:"Lysozyme" Search for other PDB entries]<br><b>Enterobacteria phage P21</b> (2 PDB entries): <br> | [http://www.ebi.ac.uk/pdbe/entry/search/index?organism_scientific:"Enterobacteria phage P22"&molecule_name:"Lysozyme" Search for other PDB entries]<br><b>**Enterobacteria phage P21</b> (2 PDB entries): <br> | ||
[[3hdf]] <div class="pdb-prints 3hdf"></div><br><br>Title: Crystal structure of truncated endolysin R21 from phage 21<br> | ***[[3hdf]] <div class="pdb-prints 3hdf"></div><br><br>Title: Crystal structure of truncated endolysin R21 from phage 21<br> | ||
1.7 A resolution <br> | 1.7 A resolution <br> | ||
<br> | <br> | ||
[http://www.ebi.ac.uk/pdbe/entry/search/index?organism_scientific:"Enterobacteria phage P21"&molecule_name:"Lysozyme" Search for other PDB entries]<br><b>Enterobacteria phage T4</b> (561 PDB entries): <br> | [http://www.ebi.ac.uk/pdbe/entry/search/index?organism_scientific:"Enterobacteria phage P21"&molecule_name:"Lysozyme" Search for other PDB entries]<br><b>**Enterobacteria phage T4</b> (561 PDB entries): <br> | ||
[[1swy]] <div class="pdb-prints 1swy"></div><br><br>Title: Use of a Halide Binding Site to Bypass the 1000-atom Limit to Ab initio Structure Determination<br> | ***[[1swy]] <div class="pdb-prints 1swy"></div><br><br>Title: Use of a Halide Binding Site to Bypass the 1000-atom Limit to Ab initio Structure Determination<br> | ||
1.06 A resolution <br> | 1.06 A resolution <br> | ||
<br> | <br> | ||
[http://www.ebi.ac.uk/pdbe/entry/search/index?organism_scientific:"Enterobacteria phage T4"&molecule_name:"Lysozyme" Search for other PDB entries]<br><b>Escherichia phage T5</b> (1 PDB entries): <br> | [http://www.ebi.ac.uk/pdbe/entry/search/index?organism_scientific:"Enterobacteria phage T4"&molecule_name:"Lysozyme" Search for other PDB entries]<br><b>**Escherichia phage T5</b> (1 PDB entries): <br> | ||
[[2mxz]] <div class="pdb-prints 2mxz"></div><br><br>Title: Bacteriophage T5 l-alanoyl-d-glutamate peptidase comlpex with Zn2+ (Endo T5-ZN2+)<br> | ***[[2mxz]] <div class="pdb-prints 2mxz"></div><br><br>Title: Bacteriophage T5 l-alanoyl-d-glutamate peptidase comlpex with Zn2+ (Endo T5-ZN2+)<br> | ||
N/A A resolution <br> | N/A A resolution <br> | ||
<br> | <br> | ||
<br><b>Enterobacteria phage lambda</b> (3 PDB entries): <br> | <br><b>**Enterobacteria phage lambda</b> (3 PDB entries): <br> | ||
[[1am7]] <div class="pdb-prints 1am7"></div><br><br>Title: Lysozyme from bacteriophage lambda<br> | ***[[1am7]] <div class="pdb-prints 1am7"></div><br><br>Title: Lysozyme from bacteriophage lambda<br> | ||
2.3 A resolution <br> | 2.3 A resolution <br> | ||
<br> | <br> | ||
[http://www.ebi.ac.uk/pdbe/entry/search/index?organism_scientific:"Enterobacteria phage lambda"&molecule_name:"Lysozyme" Search for other PDB entries]<br><b>Streptococcus phage CP-7</b> (1 PDB entries): <br> | [http://www.ebi.ac.uk/pdbe/entry/search/index?organism_scientific:"Enterobacteria phage lambda"&molecule_name:"Lysozyme" Search for other PDB entries]<br><b>**Streptococcus phage CP-7</b> (1 PDB entries): <br> | ||
[[4cvd]] <div class="pdb-prints 4cvd"></div><br><br>Title: Crystal structure of the central repeat of cell wall binding module of Cpl7<br> | ***[[4cvd]] <div class="pdb-prints 4cvd"></div><br><br>Title: Crystal structure of the central repeat of cell wall binding module of Cpl7<br> | ||
1.666 A resolution <br> | 1.666 A resolution <br> | ||
<br> | <br> | ||
<br><b>Enterobacteria phage P1</b> (2 PDB entries): <br> | <br><b>**Enterobacteria phage P1</b> (2 PDB entries): <br> | ||
[[1xju]] <div class="pdb-prints 1xju"></div><br><br>Title: Crystal structure of secreted inactive form of P1 phage endolysin Lyz<br> | ***[[1xju]] <div class="pdb-prints 1xju"></div><br><br>Title: Crystal structure of secreted inactive form of P1 phage endolysin Lyz<br> | ||
1.07 A resolution <br> | 1.07 A resolution <br> | ||
<br> | <br> | ||
[http://www.ebi.ac.uk/pdbe/entry/search/index?organism_scientific:"Enterobacteria phage P1"&molecule_name:"Lysozyme" Search for other PDB entries]<br><b>Streptococcus phage Cp-1</b> (6 PDB entries): <br> | [http://www.ebi.ac.uk/pdbe/entry/search/index?organism_scientific:"Enterobacteria phage P1"&molecule_name:"Lysozyme" Search for other PDB entries]<br><b>**Streptococcus phage Cp-1</b> (6 PDB entries): <br> | ||
[[2j8g]] <div class="pdb-prints 2j8g"></div><br><br>Title: Crystal structure of the modular Cpl-1 endolysin complexed with a peptidoglycan analogue (E94Q mutant in complex with a tetrasaccharide- pentapeptide)<br> | ***[[2j8g]] <div class="pdb-prints 2j8g"></div><br><br>Title: Crystal structure of the modular Cpl-1 endolysin complexed with a peptidoglycan analogue (E94Q mutant in complex with a tetrasaccharide- pentapeptide)<br> | ||
1.69 A resolution <br> | 1.69 A resolution <br> | ||
<br> | <br> | ||
[http://www.ebi.ac.uk/pdbe/entry/search/index?organism_scientific:"Streptococcus phage Cp-1"&molecule_name:"Lysozyme" Search for other PDB entries]<br>Bacteria (1 PDB entries): <br><br><b>Enterobacteria phage T4</b> (1 PDB entries): <br> | [http://www.ebi.ac.uk/pdbe/entry/search/index?organism_scientific:"Streptococcus phage Cp-1"&molecule_name:"Lysozyme" Search for other PDB entries]<br>*Bacteria (1 PDB entries): <br><br><b>**Enterobacteria phage T4</b> (1 PDB entries): <br> | ||
[[2qb0]] <div class="pdb-prints 2qb0"></div><br><br>Title: Structure of the 2TEL crystallization module fused to T4 lysozyme with an Ala-Gly-Pro linker.<br> | ***[[2qb0]] <div class="pdb-prints 2qb0"></div><br><br>Title: Structure of the 2TEL crystallization module fused to T4 lysozyme with an Ala-Gly-Pro linker.<br> | ||
2.56 A resolution <br> | 2.56 A resolution <br> | ||
Other macromolecules also in this entry: Transcription factor ETV6, . <br><br> | Other macromolecules also in this entry: Transcription factor ETV6, . <br><br> | ||
<br><b>Escherichia coli</b> (1 PDB entries): <br> | <br><b>**Escherichia coli</b> (1 PDB entries): <br> | ||
[[2qb0]] <div class="pdb-prints 2qb0"></div><br><br>Title: Structure of the 2TEL crystallization module fused to T4 lysozyme with an Ala-Gly-Pro linker.<br> | ***[[2qb0]] <div class="pdb-prints 2qb0"></div><br><br>Title: Structure of the 2TEL crystallization module fused to T4 lysozyme with an Ala-Gly-Pro linker.<br> | ||
2.56 A resolution <br> | 2.56 A resolution <br> | ||
Other macromolecules also in this entry: Transcription factor ETV6, . <br><br> | Other macromolecules also in this entry: Transcription factor ETV6, . <br><br> | ||
}} |