8ca2: Difference between revisions
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[[Image:8ca2.gif|left|200px]] | [[Image:8ca2.gif|left|200px]] | ||
'''ENGINEERING THE HYDROPHOBIC POCKET OF CARBONIC ANHYDRASE II''' | {{Structure | ||
|PDB= 8ca2 |SIZE=350|CAPTION= <scene name='initialview01'>8ca2</scene>, resolution 2.4Å | |||
|SITE= | |||
|LIGAND= <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene> and <scene name='pdbligand=HG:MERCURY (II) ION'>HG</scene> | |||
|ACTIVITY= [http://en.wikipedia.org/wiki/Carbonate_dehydratase Carbonate dehydratase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.1.1 4.2.1.1] | |||
|GENE= | |||
}} | |||
'''ENGINEERING THE HYDROPHOBIC POCKET OF CARBONIC ANHYDRASE II''' | |||
==Overview== | ==Overview== | ||
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==About this Structure== | ==About this Structure== | ||
8CA2 is a [ | 8CA2 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8CA2 OCA]. | ||
==Reference== | ==Reference== | ||
Engineering the hydrophobic pocket of carbonic anhydrase II., Alexander RS, Nair SK, Christianson DW, Biochemistry. 1991 Nov 19;30(46):11064-72. PMID:[http:// | Engineering the hydrophobic pocket of carbonic anhydrase II., Alexander RS, Nair SK, Christianson DW, Biochemistry. 1991 Nov 19;30(46):11064-72. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/1932029 1932029] | ||
[[Category: Carbonate dehydratase]] | [[Category: Carbonate dehydratase]] | ||
[[Category: Homo sapiens]] | [[Category: Homo sapiens]] | ||
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[[Category: lyase(oxo-acid)]] | [[Category: lyase(oxo-acid)]] | ||
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 19:15:19 2008'' | ||
Revision as of 20:15, 20 March 2008
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| , resolution 2.4Å | |||||||
|---|---|---|---|---|---|---|---|
| Ligands: | and | ||||||
| Activity: | Carbonate dehydratase, with EC number 4.2.1.1 | ||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||
ENGINEERING THE HYDROPHOBIC POCKET OF CARBONIC ANHYDRASE II
OverviewOverview
Wild-type and mutant human carbonic anhydrases II, where mutations have been made in the hydrophobic pocket of the active site, have been studied by X-ray crystallographic methods. Specifically, mutations at Val-143 (the base of the pocket) lead to significant changes in catalytic activity and protein structure. The obliteration of a well-defined pocket in the Val-143----Phe and Val-143----Tyr mutants results in significantly diminished enzyme activity [(5 x 10(4))-fold and (3 x 10(5))-fold, respectively]; however, the activity of the Val-143----His mutant is diminished less (10(2)-fold), and deepening the pocket in the Val-143----Gly mutant results in only a 2-fold decrease in activity [Fierke et al., 1991 (preceding paper in this issue)]. These results indicate that the hydrophobic pocket is important for substrate association with the enzyme, but there are probably several catalytically acceptable substrate trajectories through this region of the enzyme structure. Additionally, each mutant protein exhibits long-range (ca. 10-15 A) compensatory structural changes which accommodate the Val-143 substitution. As such, the genetic-structural approach represented in this work serves as a three-dimensional paradigm for the redesign of specificity pockets in other protein catalysts.
DiseaseDisease
Known disease associated with this structure: Osteopetrosis, autosomal recessive 3, with renal tubular acidosis OMIM:[611492]
About this StructureAbout this Structure
8CA2 is a Single protein structure of sequence from Homo sapiens. Full crystallographic information is available from OCA.
ReferenceReference
Engineering the hydrophobic pocket of carbonic anhydrase II., Alexander RS, Nair SK, Christianson DW, Biochemistry. 1991 Nov 19;30(46):11064-72. PMID:1932029
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