Riboswitch: Difference between revisions
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Michal Harel (talk | contribs) No edit summary |
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*Adenine riboswitch | *Adenine riboswitch | ||
**[[1y26]] – AR + adenine – ''Vibrio vulnificus''<br /> | **[[1y26]], [[4tzx]], [[4tzy]], [[4xnr]] – AR + adenine – ''Vibrio vulnificus''<br /> | ||
**[[3ivn]] – BsAR (mutant) – ''Bacillus subtilis''<br /> | **[[3ivn]] – BsAR (mutant) – ''Bacillus subtilis''<br /> | ||
**[[3la5]] - BsAR (mutant) + azacytosine<br /> | **[[3la5]] - BsAR (mutant) + azacytosine<br /> | ||
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**[[2hom]] – EcTPPR + TMP<br /> | **[[2hom]] – EcTPPR + TMP<br /> | ||
**[[2hoo]], [[2hop]] – EcTPPR + TPP analog<br /> | **[[2hoo]], [[2hop]] – EcTPPR + TPP analog<br /> | ||
**[[4nya]], [[4nyb]], [[4nyc]] – EcTPPR + pyrimidine derivative<br /> | |||
**[[4nyd]] – EcTPPR + hypoxanthine <br /> | |||
**[[4nyg]] – EcTPPR + thyamine <br /> | |||
**[[3d2g]], [[3d2v]], [[3d2x]] - TPPR + TPP analog – ''Arabidopsis thaliana'' | **[[3d2g]], [[3d2v]], [[3d2x]] - TPPR + TPP analog – ''Arabidopsis thaliana'' | ||
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**[[2qwy]], [[3e5c]], [[3e5e]], [[3e5f]], [[3iqn]] - SAMR + SAM – synthetic<br /> | **[[2qwy]], [[3e5c]], [[3e5e]], [[3e5f]], [[3iqn]] - SAMR + SAM – synthetic<br /> | ||
**[[4kqy]] – BsSAMR + SAM<br /> | **[[4kqy]] – BsSAMR + SAM<br /> | ||
**[[4oqu]] - SAMR + SAM - synthetic<br /> | |||
*S-adenosylhomocysteine riboswitch | *S-adenosylhomocysteine riboswitch | ||
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**[[3mum]], [[3mur]], [[3mut]] - VcGMPR (mutant) + C-di-GMP + U1 small nuclear ribonucleoprotein<br /> | **[[3mum]], [[3mur]], [[3mut]] - VcGMPR (mutant) + C-di-GMP + U1 small nuclear ribonucleoprotein<br /> | ||
**[[3muv]] - VcGMPR (mutant) + C-di-AMP + U1 small nuclear ribonucleoprotein<br /> | **[[3muv]] - VcGMPR (mutant) + C-di-AMP + U1 small nuclear ribonucleoprotein<br /> | ||
**[[3q3z]] - GMPR + C-di-GMP – ''Clostridium acetobutylicum'' | **[[3q3z]] - GMPR + C-di-GMP – ''Clostridium acetobutylicum''<br /> | ||
**[[4qk8]], [[4qka]] – GMPR + GTP – ''Thermoanaerobacter pseudethanolicus''<br /> | |||
**[[4qk9]] – GMPR + guanosine derivative – ''Thermovirga lienii''<br /> | |||
*Glycine riboswitch | *Glycine riboswitch | ||
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**[[3suh]], [[3sux]] – EsTHFR + THF derivative – ''Eubacterium siraeum''<br /> | **[[3suh]], [[3sux]] – EsTHFR + THF derivative – ''Eubacterium siraeum''<br /> | ||
**[[3suy]] - EsTHFR + cytidine cyclic phosphate<br /> | **[[3suy]] - EsTHFR + cytidine cyclic phosphate<br /> | ||
**[[3sd1]] – THFR + | **[[3sd1]], [[4lvv]], [[4lvx]], [[4lvw]], [[4lvy]], [[4lvz]], [[4lw0]] – THFR + purine derivative – synthetic<br /> | ||
**[[3sd3]] – THFR (mutant) + pteridine derivative – synthetic<br /> | **[[3sd3]] – THFR (mutant) + pteridine derivative – synthetic<br /> | ||
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**[[4frg]], [[4frn]], [[4gma]], [[4gxy]] – CoR + aptamer domain – ''Marine metagenome''<br /> | **[[4frg]], [[4frn]], [[4gma]], [[4gxy]] – CoR + aptamer domain – ''Marine metagenome''<br /> | ||
*yybp-ykoy riboswitch | |||
**[[4y1i]] – LlYYR + Mn – ''Lactobacillus lactis''<br /> | |||
**[[4y1j]] – LlYYR (mutant) + Mn<br /> | |||
**[[4y1m]] – EcYYR <br /> | |||
}} | }} | ||
[[Category: Topic Page]] | [[Category: Topic Page]] | ||