5ah2: Difference between revisions

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'''Unreleased structure'''
==The sliding clamp of Mycobacterium smegmatis in complex with a natural product.==
 
<StructureSection load='5ah2' size='340' side='right' caption='[[5ah2]], [[Resolution|resolution]] 2.13&Aring;' scene=''>
The entry 5ah2 is ON HOLD  until Paper Publication
== Structural highlights ==
 
<table><tr><td colspan='2'>[[5ah2]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/ ] and [http://en.wikipedia.org/wiki/Streptomyces_caelicus Streptomyces caelicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5AH2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5AH2 FirstGlance]. <br>
Authors: Lukat, P., Kling, A., Heinz, D.W., Mueller, R.
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
 
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=MLU:N-METHYL-D-LEUCINE'>MLU</scene>, <scene name='pdbligand=MP8:(4R)-4-METHYL-L-PROLINE'>MP8</scene>, <scene name='pdbligand=MVA:N-METHYLVALINE'>MVA</scene>, <scene name='pdbligand=NZC:N-METHYLIDENE-L-THREONINE'>NZC</scene></td></tr>
Description: The sliding clamp of Mycobacterium smegmatis in complex with a natural product.
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5agu|5agu]], [[5agv|5agv]], [[5ah4|5ah4]]</td></tr>
[[Category: Unreleased Structures]]
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/DNA-directed_DNA_polymerase DNA-directed DNA polymerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.7 2.7.7.7] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5ah2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ah2 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=5ah2 RCSB], [http://www.ebi.ac.uk/pdbsum/5ah2 PDBsum]</span></td></tr>
</table>
== Function ==
[[http://www.uniprot.org/uniprot/A0QND6_MYCS2 A0QND6_MYCS2]] DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP-independent) along duplex DNA.[PIRNR:PIRNR000804]
__TOC__
</StructureSection>
[[Category: DNA-directed DNA polymerase]]
[[Category: Streptomyces caelicus]]
[[Category: Heinz, D W]]
[[Category: Kling, A]]
[[Category: Kling, A]]
[[Category: Lukat, P]]
[[Category: Mueller, R]]
[[Category: Mueller, R]]
[[Category: Lukat, P]]
[[Category: Dna polymerase]]
[[Category: Heinz, D.W]]
[[Category: Dnan]]
[[Category: Transferase-antibiotic complex]]
[[Category: Tuberculosis]]

Revision as of 15:51, 3 June 2015

The sliding clamp of Mycobacterium smegmatis in complex with a natural product.The sliding clamp of Mycobacterium smegmatis in complex with a natural product.

Structural highlights

5ah2 is a 8 chain structure with sequence from [1] and Streptomyces caelicus. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:
NonStd Res:, , , ,
Activity:DNA-directed DNA polymerase, with EC number 2.7.7.7
Resources:FirstGlance, OCA, RCSB, PDBsum

Function

[A0QND6_MYCS2] DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP-independent) along duplex DNA.[PIRNR:PIRNR000804]

5ah2, resolution 2.13Å

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OCA