2rk8: Difference between revisions

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-[[Image:2rk8.jpg|left|200px]]<br /><applet load="2rk8" size="350" color="white" frame="true" align="right" spinBox="true"
+[[Image:2rk8.jpg|left|200px]]
-caption="2rk8, resolution 2.000&Aring;" />
-'''The Structure of rat cytosolic PEPCK in complex with phosphonoformate'''<br />
+ {{Structure
+|PDB= 2rk8 |SIZE=350|CAPTION= <scene name='initialview01'>2rk8</scene>, resolution 2.000&Aring;
+|SITE= <scene name='pdbsite=AC1:Mn+Binding+Site+For+Residue+A+700'>AC1</scene>, <scene name='pdbsite=AC2:Na+Binding+Site+For+Residue+A+624'>AC2</scene>, <scene name='pdbsite=AC3:Mn+Binding+Site+For+Residue+B+700'>AC3</scene>, <scene name='pdbsite=AC4:Na+Binding+Site+For+Residue+B+624'>AC4</scene>, <scene name='pdbsite=AC5:Ppf+Binding+Site+For+Residue+A+3969'>AC5</scene>, <scene name='pdbsite=AC6:Ppf+Binding+Site+For+Residue+B+3969'>AC6</scene>, <scene name='pdbsite=AC7:Fmt+Binding+Site+For+Residue+A+3406'>AC7</scene>, <scene name='pdbsite=AC8:Peg+Binding+Site+For+Residue+A+5759'>AC8</scene> and <scene name='pdbsite=AC9:Fmt+Binding+Site+For+Residue+B+3406'>AC9</scene>
+|LIGAND= <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PPF:PHOSPHONOFORMIC+ACID'>PPF</scene>, <scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene> and <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>
+|ACTIVITY= [http://en.wikipedia.org/wiki/Phosphoenolpyruvate_carboxykinase_(GTP) Phosphoenolpyruvate carboxykinase (GTP)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.32 4.1.1.32]
+|GENE= Pck1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10116 Rattus norvegicus])
+}}
+'''The Structure of rat cytosolic PEPCK in complex with phosphonoformate'''
 ==Overview==
@@ Line 7: / Line 16: @@
 ==About this Structure==
-RK8 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus] with <scene name='pdbligand=MN:'>MN</scene>, <scene name='pdbligand=NA:'>NA</scene>, <scene name='pdbligand=PPF:'>PPF</scene>, <scene name='pdbligand=FMT:'>FMT</scene> and <scene name='pdbligand=PEG:'>PEG</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Phosphoenolpyruvate_carboxykinase_(GTP) Phosphoenolpyruvate carboxykinase (GTP)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.32 4.1.1.32] Known structural/functional Sites: <scene name='pdbsite=AC1:Mn+Binding+Site+For+Residue+A+700'>AC1</scene>, <scene name='pdbsite=AC2:Na+Binding+Site+For+Residue+A+624'>AC2</scene>, <scene name='pdbsite=AC3:Mn+Binding+Site+For+Residue+B+700'>AC3</scene>, <scene name='pdbsite=AC4:Na+Binding+Site+For+Residue+B+624'>AC4</scene>, <scene name='pdbsite=AC5:Ppf+Binding+Site+For+Residue+A+3969'>AC5</scene>, <scene name='pdbsite=AC6:Ppf+Binding+Site+For+Residue+B+3969'>AC6</scene>, <scene name='pdbsite=AC7:Fmt+Binding+Site+For+Residue+A+3406'>AC7</scene>, <scene name='pdbsite=AC8:Peg+Binding+Site+For+Residue+A+5759'>AC8</scene> and <scene name='pdbsite=AC9:Fmt+Binding+Site+For+Residue+B+3406'>AC9</scene>. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RK8 OCA].
+RK8 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RK8 OCA].
 ==Reference==
-Differential Inhibition of Cytosolic PEPCK by Substrate Analogues. Kinetic and Structural Characterization of Inhibitor Recognition., Stiffin RM, Sullivan SM, Carlson GM, Holyoak T, Biochemistry. 2008 Feb 19;47(7):2099-109. Epub 2008 Jan 16. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=18197707 18197707]
+Differential Inhibition of Cytosolic PEPCK by Substrate Analogues. Kinetic and Structural Characterization of Inhibitor Recognition., Stiffin RM, Sullivan SM, Carlson GM, Holyoak T, Biochemistry. 2008 Feb 19;47(7):2099-109. Epub 2008 Jan 16. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18197707 18197707]
 [[Category: Phosphoenolpyruvate carboxykinase (GTP)]]
 [[Category: Rattus norvegicus]]
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 [[Category: nucleotide-binding]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 27 07:48:09 2008''
+''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 18:37:02 2008''