4d2g: Difference between revisions

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'''Unreleased structure'''
==Crystal structure of human PCNA in complex with p15 peptide==
 
<StructureSection load='4d2g' size='340' side='right' caption='[[4d2g]], [[Resolution|resolution]] 2.65&Aring;' scene=''>
The entry 4d2g is ON HOLD  until Paper Publication
== Structural highlights ==
 
<table><tr><td colspan='2'>[[4d2g]] is a 5 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4D2G OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4D2G FirstGlance]. <br>
Authors: DeBiasio, A., Ibanez, A., Mortuza, G., Molina, R., Cordeiro, T.N., Castillo, F., Villate, M., Merino, N., Lelli, M., Diercks, T., Luque, I., Bernardo, P., Montoya, G., Blanco, F.J.
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4d2g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4d2g OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4d2g RCSB], [http://www.ebi.ac.uk/pdbsum/4d2g PDBsum]</span></td></tr>
 
</table>
Description: Crystal structure of human PCNA in complex with p15 peptide
== Function ==
[[Category: Unreleased Structures]]
[[http://www.uniprot.org/uniprot/PCNA_HUMAN PCNA_HUMAN]] Auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand. Induces a robust stimulatory effect on the 3'-5' exonuclease and 3'-phosphodiesterase, but not apurinic-apyrimidinic (AP) endonuclease, APEX2 activities. Has to be loaded onto DNA in order to be able to stimulate APEX2. Plays a key role in DNA damage response (DDR) by being conveniently positioned at the replication fork to coordinate DNA replication with DNA repair and DNA damage tolerance pathways. Acts as a loading platform to recruit DDR proteins that allow completion of DNA replication after DNA damage and promote postreplication repair: Monoubiquitinated PCNA leads to recruitment of translesion (TLS) polymerases, while 'Lys-63'-linked polyubiquitination of PCNA is involved in error-free pathway and employs recombination mechanisms to synthesize across the lesion.<ref>PMID:19443450</ref> <ref>PMID:18719106</ref> 
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Bernardo, P]]
[[Category: Blanco, F J]]
[[Category: Castillo, F]]
[[Category: Cordeiro, T N]]
[[Category: DeBiasio, A]]
[[Category: Diercks, T]]
[[Category: Ibanez, A]]
[[Category: Ibanez, A]]
[[Category: Lelli, M]]
[[Category: Lelli, M]]
[[Category: Castillo, F]]
[[Category: Luque, I]]
[[Category: Bernardo, P]]
[[Category: Merino, N]]
[[Category: Diercks, T]]
[[Category: Molina, R]]
[[Category: Molina, R]]
[[Category: Merino, N]]
[[Category: Montoya, G]]
[[Category: Blanco, F.J]]
[[Category: Mortuza, G]]
[[Category: Luque, I]]
[[Category: Debiasio, A]]
[[Category: Cordeiro, T.N]]
[[Category: Villate, M]]
[[Category: Villate, M]]
[[Category: Mortuza, G]]
[[Category: Transcription]]
[[Category: Montoya, G]]

Revision as of 15:09, 18 March 2015

Crystal structure of human PCNA in complex with p15 peptideCrystal structure of human PCNA in complex with p15 peptide

Structural highlights

4d2g is a 5 chain structure. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Resources:FirstGlance, OCA, RCSB, PDBsum

Function

[PCNA_HUMAN] Auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand. Induces a robust stimulatory effect on the 3'-5' exonuclease and 3'-phosphodiesterase, but not apurinic-apyrimidinic (AP) endonuclease, APEX2 activities. Has to be loaded onto DNA in order to be able to stimulate APEX2. Plays a key role in DNA damage response (DDR) by being conveniently positioned at the replication fork to coordinate DNA replication with DNA repair and DNA damage tolerance pathways. Acts as a loading platform to recruit DDR proteins that allow completion of DNA replication after DNA damage and promote postreplication repair: Monoubiquitinated PCNA leads to recruitment of translesion (TLS) polymerases, while 'Lys-63'-linked polyubiquitination of PCNA is involved in error-free pathway and employs recombination mechanisms to synthesize across the lesion.[1] [2]

References

  1. Burkovics P, Hajdu I, Szukacsov V, Unk I, Haracska L. Role of PCNA-dependent stimulation of 3'-phosphodiesterase and 3'-5' exonuclease activities of human Ape2 in repair of oxidative DNA damage. Nucleic Acids Res. 2009 Jul;37(13):4247-55. doi: 10.1093/nar/gkp357. Epub 2009, May 13. PMID:19443450 doi:10.1093/nar/gkp357
  2. Motegi A, Liaw HJ, Lee KY, Roest HP, Maas A, Wu X, Moinova H, Markowitz SD, Ding H, Hoeijmakers JH, Myung K. Polyubiquitination of proliferating cell nuclear antigen by HLTF and SHPRH prevents genomic instability from stalled replication forks. Proc Natl Acad Sci U S A. 2008 Aug 26;105(34):12411-6. Epub 2008 Aug 21. PMID:18719106 doi:0805685105

4d2g, resolution 2.65Å

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