2x2s: Difference between revisions

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</StructureSection>
</StructureSection>
[[Category: Sclerotinia sclerotiorum]]
[[Category: Sclerotinia sclerotiorum]]
[[Category: Bourne, Y.]]
[[Category: Bourne, Y]]
[[Category: Damme, E J.M Van.]]
[[Category: Damme, E J.M Van]]
[[Category: Peumans, W J.]]
[[Category: Peumans, W J]]
[[Category: Roig-Zamboni, V.]]
[[Category: Roig-Zamboni, V]]
[[Category: Rouge, P.]]
[[Category: Rouge, P]]
[[Category: Sulzenbacher, G.]]
[[Category: Sulzenbacher, G]]
[[Category: Beta-trefoil domain]]
[[Category: Beta-trefoil domain]]
[[Category: Cell adhesion]]
[[Category: Cell adhesion]]
[[Category: Fungal lectin]]
[[Category: Fungal lectin]]

Revision as of 10:59, 25 January 2015

CRYSTAL STRUCTURE OF SCLEROTINIA SCLEROTIORUM AGGLUTININ SSACRYSTAL STRUCTURE OF SCLEROTINIA SCLEROTIORUM AGGLUTININ SSA

Structural highlights

2x2s is a 4 chain structure with sequence from Sclerotinia sclerotiorum. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:
Resources:FirstGlance, OCA, RCSB, PDBsum

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

Publication Abstract from PubMed

A lectin from the phytopathogenic ascomycete Sclerotinia sclerotiorum that shares only weak sequence similarity with characterized fungal lectins has recently been identified. S. sclerotiorum agglutinin (SSA) is a homodimeric protein consisting of two identical subunits of approximately 17 kDa and displays specificity primarily towards Gal/GalNAc. Glycan array screening indicates that SSA readily interacts with Gal/GalNAc-bearing glycan chains. The crystal structures of SSA in the ligand-free form and in complex with the Gal-beta1,3-GalNAc (T-antigen) disaccharide have been determined at 1.6 and 1.97 A resolution, respectively. SSA adopts a beta-trefoil domain as previously identified for other carbohydrate-binding proteins of the ricin B-like lectin superfamily and accommodates terminal non-reducing galactosyl and N-acetylgalactosaminyl glycans. Unlike other structurally related lectins, SSA contains a single carbohydrate-binding site at site alpha. SSA reveals a novel dimeric assembly markedly dissimilar to those described earlier for ricin-type lectins. The present structure exemplifies the adaptability of the beta-trefoil domain in the evolution of fungal lectins.

Crystal structure of the GalNAc/Gal-specific agglutinin from the phytopathogenic ascomycete Sclerotinia sclerotiorum reveals novel adaptation of a beta-trefoil domain.,Sulzenbacher G, Roig-Zamboni V, Peumans WJ, Rouge P, Van Damme EJ, Bourne Y J Mol Biol. 2010 Jul 23;400(4):715-23. Epub 2010 May 24. PMID:20566411[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

  1. Sulzenbacher G, Roig-Zamboni V, Peumans WJ, Rouge P, Van Damme EJ, Bourne Y. Crystal structure of the GalNAc/Gal-specific agglutinin from the phytopathogenic ascomycete Sclerotinia sclerotiorum reveals novel adaptation of a beta-trefoil domain. J Mol Biol. 2010 Jul 23;400(4):715-23. Epub 2010 May 24. PMID:20566411 doi:10.1016/j.jmb.2010.05.038

2x2s, resolution 1.60Å

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OCA