4jo4: Difference between revisions

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{{STRUCTURE_4jo4| PDB=4jo4 | SCENE= }}
==Crystal structure of rabbit mAb R20 Fab==
===Crystal structure of rabbit mAb R20 Fab===
<StructureSection load='4jo4' size='340' side='right' caption='[[4jo4]], [[Resolution|resolution]] 2.27&Aring;' scene=''>
{{ABSTRACT_PUBMED_23864637}}
== Structural highlights ==
<table><tr><td colspan='2'>[[4jo4]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Oryctolagus_cuniculus Oryctolagus cuniculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4JO4 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4JO4 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=1PE:PENTAETHYLENE+GLYCOL'>1PE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4jo1|4jo1]], [[4jo2|4jo2]], [[4jo3|4jo3]]</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4jo4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4jo4 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4jo4 RCSB], [http://www.ebi.ac.uk/pdbsum/4jo4 PDBsum]</span></td></tr>
</table>
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
The Rabbit is a commonly used animal model in studying antibody responses in HIV/AIDS vaccine development. However, no rabbit monoclonal antibodies have been developed previously to study the epitope specific antibody responses against HIV-1 envelope glycoproteins (Env), and little is known about how the rabbit immune system can mimic the human immune system in eliciting such antibodies. Here we present structural analyses of two rabbit monoclonal antibodies (mAbs), R56 and R20, against the third variable region (V3) of HIV-1 gp120. R56 recognizes the well-studied immunogenic region in the V3 crown, while R20 targets a less-studied region at the C-terminus of V3. By comparison of the Fab/epitope complex structures of these two antibodies raised by immunization with that of the corresponding human antibodies derived from patients chronically infected by HIV-1, we found that rabbit antibodies can recognize immunogenic regions of gp120 and mimic the binding modes of human antibodies. This result can provide new insight in using the rabbit as an animal model in AIDS vaccine development.


==About this Structure==
Rabbit anti-HIV-1 monoclonal antibodies raised by immunization can mimic the antigen-binding modes of antibodies derived from HIV-1 infected humans.,Pan R, Sampson JM, Chen Y, Vaine M, Wang S, Lu S, Kong XP J Virol. 2013 Jul 17. PMID:23864637<ref>PMID:23864637</ref>
[[4jo4]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Oryctolagus_cuniculus Oryctolagus cuniculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4JO4 OCA].
 
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>


==See Also==
==See Also==
*[[Monoclonal Antibody|Monoclonal Antibody]]
*[[Monoclonal Antibody|Monoclonal Antibody]]
 
== References ==
==Reference==
<references/>
<ref group="xtra">PMID:023864637</ref><references group="xtra"/><references/>
__TOC__
</StructureSection>
[[Category: Oryctolagus cuniculus]]
[[Category: Oryctolagus cuniculus]]
[[Category: Kong, X P.]]
[[Category: Kong, X P]]
[[Category: Pan, R M.]]
[[Category: Pan, R M]]
[[Category: Antibody]]
[[Category: Antibody]]
[[Category: Ig]]
[[Category: Ig]]
[[Category: Immune system]]
[[Category: Immune system]]

Revision as of 17:14, 4 January 2015

Crystal structure of rabbit mAb R20 FabCrystal structure of rabbit mAb R20 Fab

Structural highlights

4jo4 is a 4 chain structure with sequence from Oryctolagus cuniculus. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:,
Resources:FirstGlance, OCA, RCSB, PDBsum

Publication Abstract from PubMed

The Rabbit is a commonly used animal model in studying antibody responses in HIV/AIDS vaccine development. However, no rabbit monoclonal antibodies have been developed previously to study the epitope specific antibody responses against HIV-1 envelope glycoproteins (Env), and little is known about how the rabbit immune system can mimic the human immune system in eliciting such antibodies. Here we present structural analyses of two rabbit monoclonal antibodies (mAbs), R56 and R20, against the third variable region (V3) of HIV-1 gp120. R56 recognizes the well-studied immunogenic region in the V3 crown, while R20 targets a less-studied region at the C-terminus of V3. By comparison of the Fab/epitope complex structures of these two antibodies raised by immunization with that of the corresponding human antibodies derived from patients chronically infected by HIV-1, we found that rabbit antibodies can recognize immunogenic regions of gp120 and mimic the binding modes of human antibodies. This result can provide new insight in using the rabbit as an animal model in AIDS vaccine development.

Rabbit anti-HIV-1 monoclonal antibodies raised by immunization can mimic the antigen-binding modes of antibodies derived from HIV-1 infected humans.,Pan R, Sampson JM, Chen Y, Vaine M, Wang S, Lu S, Kong XP J Virol. 2013 Jul 17. PMID:23864637[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

See Also

References

  1. Pan R, Sampson JM, Chen Y, Vaine M, Wang S, Lu S, Kong XP. Rabbit anti-HIV-1 monoclonal antibodies raised by immunization can mimic the antigen-binding modes of antibodies derived from HIV-1 infected humans. J Virol. 2013 Jul 17. PMID:23864637 doi:10.1128/JVI.00843-13

4jo4, resolution 2.27Å

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