2epl: Difference between revisions

Newer edit →

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

@@ Line 1: / Line 1: @@
-[[Image:2epl.jpg|left|200px]]<br /><applet load="2epl" size="350" color="white" frame="true" align="right" spinBox="true"
+[[Image:2epl.jpg|left|200px]]
-caption="2epl, resolution 1.40&Aring;" />
-'''N-acetyl-B-D-glucosaminidase (GCNA) from Streptococcus gordonii'''<br />
+ {{Structure
+|PDB= 2epl |SIZE=350|CAPTION= <scene name='initialview01'>2epl</scene>, resolution 1.40&Aring;
+|SITE= <scene name='pdbsite=AC1:So4+Binding+Site+For+Residue+X+740'>AC1</scene>, <scene name='pdbsite=AC2:So4+Binding+Site+For+Residue+X+741'>AC2</scene>, <scene name='pdbsite=AC3:So4+Binding+Site+For+Residue+X+742'>AC3</scene>, <scene name='pdbsite=AC4:So4+Binding+Site+For+Residue+X+743'>AC4</scene>, <scene name='pdbsite=AC5:So4+Binding+Site+For+Residue+X+744'>AC5</scene>, <scene name='pdbsite=AC6:So4+Binding+Site+For+Residue+X+745'>AC6</scene>, <scene name='pdbsite=AC7:So4+Binding+Site+For+Residue+X+746'>AC7</scene>, <scene name='pdbsite=AC8:So4+Binding+Site+For+Residue+X+747'>AC8</scene> and <scene name='pdbsite=AC9:Gol+Binding+Site+For+Residue+X+731'>AC9</scene>
+|LIGAND= <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene> and <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>
+|ACTIVITY= [http://en.wikipedia.org/wiki/Beta-N-acetylhexosaminidase Beta-N-acetylhexosaminidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.52 3.2.1.52]
+|GENE= gcna ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1302 Streptococcus gordonii])
+}}
+'''N-acetyl-B-D-glucosaminidase (GCNA) from Streptococcus gordonii'''
 ==Overview==
@@ Line 7: / Line 16: @@
 ==About this Structure==
-EPL is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Streptococcus_gordonii Streptococcus gordonii] with <scene name='pdbligand=SO4:'>SO4</scene> and <scene name='pdbligand=GOL:'>GOL</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Beta-N-acetylhexosaminidase Beta-N-acetylhexosaminidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.52 3.2.1.52] Known structural/functional Sites: <scene name='pdbsite=AC1:So4+Binding+Site+For+Residue+X+740'>AC1</scene>, <scene name='pdbsite=AC2:So4+Binding+Site+For+Residue+X+741'>AC2</scene>, <scene name='pdbsite=AC3:So4+Binding+Site+For+Residue+X+742'>AC3</scene>, <scene name='pdbsite=AC4:So4+Binding+Site+For+Residue+X+743'>AC4</scene>, <scene name='pdbsite=AC5:So4+Binding+Site+For+Residue+X+744'>AC5</scene>, <scene name='pdbsite=AC6:So4+Binding+Site+For+Residue+X+745'>AC6</scene>, <scene name='pdbsite=AC7:So4+Binding+Site+For+Residue+X+746'>AC7</scene>, <scene name='pdbsite=AC8:So4+Binding+Site+For+Residue+X+747'>AC8</scene> and <scene name='pdbsite=AC9:Gol+Binding+Site+For+Residue+X+731'>AC9</scene>. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EPL OCA].
+EPL is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Streptococcus_gordonii Streptococcus gordonii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EPL OCA].
 ==Reference==
-Structure of N-acetyl-beta-D-glucosaminidase (GcnA) from the endocarditis pathogen Streptococcus gordonii and its complex with the mechanism-based inhibitor NAG-thiazoline., Langley DB, Harty DW, Jacques NA, Hunter N, Guss JM, Collyer CA, J Mol Biol. 2008 Mar 14;377(1):104-16. Epub 2007 Sep 16. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=18237743 18237743]
+Structure of N-acetyl-beta-D-glucosaminidase (GcnA) from the endocarditis pathogen Streptococcus gordonii and its complex with the mechanism-based inhibitor NAG-thiazoline., Langley DB, Harty DW, Jacques NA, Hunter N, Guss JM, Collyer CA, J Mol Biol. 2008 Mar 14;377(1):104-16. Epub 2007 Sep 16. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18237743 18237743]
 [[Category: Beta-N-acetylhexosaminidase]]
 [[Category: Single protein]]
@@ Line 25: / Line 34: @@
 [[Category: glycoside hydrolase]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri Mar 14 09:30:35 2008''
+''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 16:43:01 2008''