3aon: Difference between revisions

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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3aon FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3aon OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3aon RCSB], [http://www.ebi.ac.uk/pdbsum/3aon PDBsum]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3aon FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3aon OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3aon RCSB], [http://www.ebi.ac.uk/pdbsum/3aon PDBsum]</span></td></tr>
</table>
</table>
== Function ==
[[http://www.uniprot.org/uniprot/NTPG_ENTHR NTPG_ENTHR]] Involved in ATP-driven sodium extrusion.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</StructureSection>
</StructureSection>
[[Category: Enterococcus hirae]]
[[Category: Enterococcus hirae]]
[[Category: Arai, S.]]
[[Category: Arai, S]]
[[Category: Hossain, K M.M.]]
[[Category: Hossain, K M.M]]
[[Category: Ishizuka-Katsura, Y.]]
[[Category: Ishizuka-Katsura, Y]]
[[Category: Iwata, S.]]
[[Category: Iwata, S]]
[[Category: Kakinuma, Y.]]
[[Category: Kakinuma, Y]]
[[Category: Murata, T.]]
[[Category: Murata, T]]
[[Category: Saijo, S.]]
[[Category: Saijo, S]]
[[Category: Shirouzu, M.]]
[[Category: Shirouzu, M]]
[[Category: Terada, T.]]
[[Category: Terada, T]]
[[Category: Yamato, I.]]
[[Category: Yamato, I]]
[[Category: Yokoyama, S.]]
[[Category: Yokoyama, S]]
[[Category: Alpha/beta fold]]
[[Category: Alpha/beta fold]]
[[Category: Central axis]]
[[Category: Central axis]]

Revision as of 14:49, 25 December 2014

Crystal structure of the central axis (NtpD-NtpG) in the catalytic portion of Enterococcus hirae V-type sodium ATPaseCrystal structure of the central axis (NtpD-NtpG) in the catalytic portion of Enterococcus hirae V-type sodium ATPase

Structural highlights

3aon is a 2 chain structure with sequence from Enterococcus hirae. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:
NonStd Res:
Gene:ntpD (Enterococcus hirae), ntpG, ntpQ (Enterococcus hirae)
Activity:H(+)-transporting two-sector ATPase, with EC number 3.6.3.14
Resources:FirstGlance, OCA, RCSB, PDBsum

Function

[NTPG_ENTHR] Involved in ATP-driven sodium extrusion.

Publication Abstract from PubMed

V-ATPases function as ATP-dependent ion pumps in various membrane systems of living organisms. ATP hydrolysis causes rotation of the central rotor complex, which is composed of the central axis D subunit and a membrane c ring that are connected by F and d subunits. Here we determined the crystal structure of the DF complex of the prokaryotic V-ATPase of Enterococcus hirae at 2.0-A resolution. The structure of the D subunit comprised a long left-handed coiled coil with a unique short beta-hairpin region that is effective in stimulating the ATPase activity of V(1)-ATPase by twofold. The F subunit is bound to the middle portion of the D subunit. The C-terminal helix of the F subunit, which was believed to function as a regulatory region by extending into the catalytic A(3)B(3) complex, contributes to tight binding to the D subunit by forming a three-helix bundle. Both D and F subunits are necessary to bind the d subunit that links to the c ring. From these findings, we modeled the entire rotor complex (DFdc ring) of V-ATPase.

Crystal structure of the central axis DF complex of the prokaryotic V-ATPase.,Saijo S, Arai S, Hossain KM, Yamato I, Suzuki K, Kakinuma Y, Ishizuka-Katsura Y, Ohsawa N, Terada T, Shirouzu M, Yokoyama S, Iwata S, Murata T Proc Natl Acad Sci U S A. 2011 Dec 13;108(50):19955-60. Epub 2011 Nov 23. PMID:22114184[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

See Also

References

  1. Saijo S, Arai S, Hossain KM, Yamato I, Suzuki K, Kakinuma Y, Ishizuka-Katsura Y, Ohsawa N, Terada T, Shirouzu M, Yokoyama S, Iwata S, Murata T. Crystal structure of the central axis DF complex of the prokaryotic V-ATPase. Proc Natl Acad Sci U S A. 2011 Dec 13;108(50):19955-60. Epub 2011 Nov 23. PMID:22114184 doi:10.1073/pnas.1108810108

3aon, resolution 2.00Å

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