1h15: Difference between revisions
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== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[1h15]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1H15 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1H15 FirstGlance]. <br> | <table><tr><td colspan='2'>[[1h15]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1H15 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1H15 FirstGlance]. <br> | ||
</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>< | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr> | ||
<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1a6a|1a6a]], [[1aqd|1aqd]], [[1d5m|1d5m]], [[1d5x|1d5x]], [[1d5z|1d5z]], [[1d6e|1d6e]], [[1dlh|1dlh]], [[1fv1|1fv1]], [[1hqr|1hqr]], [[1hxy|1hxy]], [[1j8h|1j8h]], [[1kg0|1kg0]], [[1seb|1seb]], [[2seb|2seb]]</td></tr> | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1a6a|1a6a]], [[1aqd|1aqd]], [[1d5m|1d5m]], [[1d5x|1d5x]], [[1d5z|1d5z]], [[1d6e|1d6e]], [[1dlh|1dlh]], [[1fv1|1fv1]], [[1hqr|1hqr]], [[1hxy|1hxy]], [[1j8h|1j8h]], [[1kg0|1kg0]], [[1seb|1seb]], [[2seb|2seb]]</td></tr> | ||
<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/DNA-directed_DNA_polymerase DNA-directed DNA polymerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.7 2.7.7.7] </span></td></tr> | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/DNA-directed_DNA_polymerase DNA-directed DNA polymerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.7 2.7.7.7] </span></td></tr> | ||
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1h15 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1h15 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1h15 RCSB], [http://www.ebi.ac.uk/pdbsum/1h15 PDBsum]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1h15 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1h15 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1h15 RCSB], [http://www.ebi.ac.uk/pdbsum/1h15 PDBsum]</span></td></tr> | ||
<table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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[[Category: DNA-directed DNA polymerase]] | [[Category: DNA-directed DNA polymerase]] | ||
[[Category: Homo sapiens]] | [[Category: Homo sapiens]] | ||
[[Category: Andersson, C | [[Category: Andersson, C]] | ||
[[Category: Bell, J I | [[Category: Bell, J I]] | ||
[[Category: Fugger, L | [[Category: Fugger, L]] | ||
[[Category: Harlos, K | [[Category: Harlos, K]] | ||
[[Category: Hjorth, P | [[Category: Hjorth, P]] | ||
[[Category: Ikemizu, S | [[Category: Ikemizu, S]] | ||
[[Category: Jacobsen, H | [[Category: Jacobsen, H]] | ||
[[Category: Jones, E Y | [[Category: Jones, E Y]] | ||
[[Category: Lang, H | [[Category: Lang, H]] | ||
[[Category: Madsen, L | [[Category: Madsen, L]] | ||
[[Category: Sondergaard, L | [[Category: Sondergaard, L]] | ||
[[Category: Stuart, D I | [[Category: Stuart, D I]] | ||
[[Category: Svejgaard, A | [[Category: Svejgaard, A]] | ||
[[Category: Wucherpfennig, K | [[Category: Wucherpfennig, K]] | ||
[[Category: Class ii]] | [[Category: Class ii]] | ||
[[Category: Dna polymerase]] | [[Category: Dna polymerase]] | ||
Revision as of 02:20, 23 December 2014
X-ray crystal structure of HLA-DRA1*0101/DRB5*0101 complexed with a peptide from Epstein Barr Virus DNA polymerase.X-ray crystal structure of HLA-DRA1*0101/DRB5*0101 complexed with a peptide from Epstein Barr Virus DNA polymerase.
Structural highlights
Evolutionary Conservation Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf. Publication Abstract from PubMedThe multiple sclerosis (MS)-associated HLA major histocompatibility complex (MHC) class II alleles DRB1*1501, DRB5*0101 and DQB1*0602 are in strong linkage disequilibrium, making it difficult to determine which is the principal MS risk gene. Here we show that together the DRB1 and DRB5 loci may influence susceptibility to MS. We demonstrate that a T cell receptor (TCR) from an MS patient recognized both a DRB1*1501-restricted myelin basic protein (MBP) and DRB5*0101-restricted Epstein-Barr virus (EBV) peptide. Crystal structure determination of the DRB5*0101-EBV peptide complex revealed a marked degree of structural equivalence to the DRB1*1501-MBP peptide complex at the surface presented for TCR recognition. This provides structural evidence for molecular mimicry involving HLA molecules. The structural details suggest an explanation for the preponderance of MHC class II associations in HLA-associated diseases. A functional and structural basis for TCR cross-reactivity in multiple sclerosis.,Lang HL, Jacobsen H, Ikemizu S, Andersson C, Harlos K, Madsen L, Hjorth P, Sondergaard L, Svejgaard A, Wucherpfennig K, Stuart DI, Bell JI, Jones EY, Fugger L Nat Immunol. 2002 Oct;3(10):940-3. Epub 2002 Sep 3. PMID:12244309[1] From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine. See AlsoReferences
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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)
OCACategories:
- DNA-directed DNA polymerase
- Homo sapiens
- Andersson, C
- Bell, J I
- Fugger, L
- Harlos, K
- Hjorth, P
- Ikemizu, S
- Jacobsen, H
- Jones, E Y
- Lang, H
- Madsen, L
- Sondergaard, L
- Stuart, D I
- Svejgaard, A
- Wucherpfennig, K
- Class ii
- Dna polymerase
- Dna-directed dna polymerase
- Dr2
- Drb5
- Ebv
- Hla
- Immune system
- Immune system-transferase complex
- Immune system/transferase
- Mhc