1ed1: Difference between revisions

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== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[1ed1]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Simian_immunodeficiency_virus_-_mac Simian immunodeficiency virus - mac]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ED1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ED1 FirstGlance]. <br>
<table><tr><td colspan='2'>[[1ed1]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Simian_immunodeficiency_virus_-_mac Simian immunodeficiency virus - mac]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ED1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ED1 FirstGlance]. <br>
</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=IPA:ISOPROPYL+ALCOHOL'>IPA</scene><br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=IPA:ISOPROPYL+ALCOHOL'>IPA</scene></td></tr>
<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1ecw|1ecw]]</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1ecw|1ecw]]</td></tr>
<tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">GAG ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=11711 Simian immunodeficiency virus - mac])</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">GAG ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=11711 Simian immunodeficiency virus - mac])</td></tr>
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ed1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ed1 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1ed1 RCSB], [http://www.ebi.ac.uk/pdbsum/1ed1 PDBsum]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ed1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ed1 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1ed1 RCSB], [http://www.ebi.ac.uk/pdbsum/1ed1 PDBsum]</span></td></tr>
<table>
</table>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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</StructureSection>
</StructureSection>
[[Category: Simian immunodeficiency virus - mac]]
[[Category: Simian immunodeficiency virus - mac]]
[[Category: Belyaev, A.]]
[[Category: Belyaev, A]]
[[Category: Fry, E.]]
[[Category: Fry, E]]
[[Category: Jones, I M.]]
[[Category: Jones, I M]]
[[Category: Rao, Z.]]
[[Category: Rao, Z]]
[[Category: Roy, P.]]
[[Category: Roy, P]]
[[Category: Stuart, D I.]]
[[Category: Stuart, D I]]
[[Category: Trimeric association]]
[[Category: Trimeric association]]
[[Category: Viral protein]]
[[Category: Viral protein]]

Revision as of 01:02, 23 December 2014

CRYSTAL STRUCTURE OF SIMIAN IMMUNODEFICIENCY VIRUS MATRIX ANTIGEN (SIV MA) AT 100K.CRYSTAL STRUCTURE OF SIMIAN IMMUNODEFICIENCY VIRUS MATRIX ANTIGEN (SIV MA) AT 100K.

Structural highlights

1ed1 is a 1 chain structure with sequence from Simian immunodeficiency virus - mac. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:
Gene:GAG (Simian immunodeficiency virus - mac)
Resources:FirstGlance, OCA, RCSB, PDBsum

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

Publication Abstract from PubMed

Simian immunodeficiency virus (SIV) is closely related to human immunodeficiency virus (HIV), their matrix antigens (MAs) sharing some 50% sequence identity. MA is a component of Pr55Gag, the sole protein required for assembly of the virion shell. MA targets Pr55 to the plasma membrane, and facilitates incorporation of the virus envelope protein and assembly of the Pr55Gag shell. Cleavage of Pr55 by the viral protease produces the mature protein of relative molecular mass 17-18K, which underlies the host-derived membrane and is important in both virus entry and nuclear localization of the virion core. Here we report the crystal structure of SIV MA. The molecule forms a trimer consistent with oligomerization in vitro, the observed virion architecture, and various biological properties of MA.

Crystal structure of SIV matrix antigen and implications for virus assembly.,Rao Z, Belyaev AS, Fry E, Roy P, Jones IM, Stuart DI Nature. 1995 Dec 14;378(6558):743-7. PMID:7501025[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

See Also

References

  1. Rao Z, Belyaev AS, Fry E, Roy P, Jones IM, Stuart DI. Crystal structure of SIV matrix antigen and implications for virus assembly. Nature. 1995 Dec 14;378(6558):743-7. PMID:7501025 doi:http://dx.doi.org/10.1038/378743a0

1ed1, resolution 2.10Å

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