3zgi: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
No edit summary
No edit summary
Line 1: Line 1:
{{STRUCTURE_3zgi|  PDB=3zgi  |  SCENE=  }}
==Crystal structure of the KRT10-binding region domain of the pneumococcal serine rich repeat protein PsrP==
===Crystal structure of the KRT10-binding region domain of the pneumococcal serine rich repeat protein PsrP===
<StructureSection load='3zgi' size='340' side='right' caption='[[3zgi]], [[Resolution|resolution]] 2.25&Aring;' scene=''>
{{ABSTRACT_PUBMED_24430336}}
== Structural highlights ==
<table><tr><td colspan='2'>[[3zgi]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Strpn Strpn]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZGI OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ZGI FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3zgh|3zgh]]</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3zgi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3zgi OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3zgi RCSB], [http://www.ebi.ac.uk/pdbsum/3zgi PDBsum]</span></td></tr>
</table>
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
Streptococcus pneumoniae is a major human pathogen, and a leading cause of disease and death worldwide. Pneumococcal invasive disease is triggered by initial asymptomatic colonization of the human upper respiratory tract. The pneumococcal serine-rich repeat protein (PsrP) is a lung-specific virulence factor whose functional binding region (BR) binds to keratin-10 (KRT10) and promotes pneumococcal biofilm formation through self-oligomerization. We present the crystal structure of the KRT10-binding domain of PsrP (BR187-385) determined to 2.0 A resolution. BR187-385 adopts a novel variant of the DEv-IgG fold, typical for microbial surface components recognizing adhesive matrix molecules adhesins, despite very low sequence identity. An extended beta-sheet on one side of the compressed, two-sided barrel presents a basic groove that possibly binds to the acidic helical rod domain of KRT10. Our study also demonstrates the importance of the other side of the barrel, formed by extensive well-ordered loops and stabilized by short beta-strands, for interaction with KRT10.


==About this Structure==
The basic keratin 10-binding domain of the virulence-associated pneumococcal serine-rich protein PsrP adopts a novel MSCRAMM fold.,Schulte T, Lofling J, Mikaelsson C, Kikhney A, Hentrich K, Diamante A, Ebel C, Normark S, Svergun D, Henriques-Normark B, Achour A Open Biol. 2014 Jan 15;4(1):130090. doi: 10.1098/rsob.130090. PMID:24430336<ref>PMID:24430336</ref>
[[3zgi]] is a 3 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZGI OCA].


==Reference==
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
<ref group="xtra">PMID:024430336</ref><references group="xtra"/><references/>
</div>
[[Category: Achour, A.]]
== References ==
[[Category: Diamante, A.]]
<references/>
[[Category: Ebel, C.]]
__TOC__
[[Category: Henriques-Normark, B.]]
</StructureSection>
[[Category: Hentrich, K.]]
[[Category: Strpn]]
[[Category: Kikhney, A.]]
[[Category: Achour, A]]
[[Category: Loefling, J.]]
[[Category: Diamante, A]]
[[Category: Mikaelsson, C.]]
[[Category: Ebel, C]]
[[Category: Normark, S.]]
[[Category: Henriques-Normark, B]]
[[Category: Schulte, T.]]
[[Category: Hentrich, K]]
[[Category: Svergun, D.]]
[[Category: Kikhney, A]]
[[Category: Loefling, J]]
[[Category: Mikaelsson, C]]
[[Category: Normark, S]]
[[Category: Schulte, T]]
[[Category: Svergun, D]]
[[Category: Adhesin]]
[[Category: Adhesin]]
[[Category: Keratin-10]]
[[Category: Keratin-10]]
[[Category: Srrp]]
[[Category: Srrp]]
[[Category: Structural protein]]
[[Category: Structural protein]]

Revision as of 20:01, 21 December 2014

Crystal structure of the KRT10-binding region domain of the pneumococcal serine rich repeat protein PsrPCrystal structure of the KRT10-binding region domain of the pneumococcal serine rich repeat protein PsrP

Structural highlights

3zgi is a 3 chain structure with sequence from Strpn. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:,
NonStd Res:
Resources:FirstGlance, OCA, RCSB, PDBsum

Publication Abstract from PubMed

Streptococcus pneumoniae is a major human pathogen, and a leading cause of disease and death worldwide. Pneumococcal invasive disease is triggered by initial asymptomatic colonization of the human upper respiratory tract. The pneumococcal serine-rich repeat protein (PsrP) is a lung-specific virulence factor whose functional binding region (BR) binds to keratin-10 (KRT10) and promotes pneumococcal biofilm formation through self-oligomerization. We present the crystal structure of the KRT10-binding domain of PsrP (BR187-385) determined to 2.0 A resolution. BR187-385 adopts a novel variant of the DEv-IgG fold, typical for microbial surface components recognizing adhesive matrix molecules adhesins, despite very low sequence identity. An extended beta-sheet on one side of the compressed, two-sided barrel presents a basic groove that possibly binds to the acidic helical rod domain of KRT10. Our study also demonstrates the importance of the other side of the barrel, formed by extensive well-ordered loops and stabilized by short beta-strands, for interaction with KRT10.

The basic keratin 10-binding domain of the virulence-associated pneumococcal serine-rich protein PsrP adopts a novel MSCRAMM fold.,Schulte T, Lofling J, Mikaelsson C, Kikhney A, Hentrich K, Diamante A, Ebel C, Normark S, Svergun D, Henriques-Normark B, Achour A Open Biol. 2014 Jan 15;4(1):130090. doi: 10.1098/rsob.130090. PMID:24430336[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

  1. Schulte T, Lofling J, Mikaelsson C, Kikhney A, Hentrich K, Diamante A, Ebel C, Normark S, Svergun D, Henriques-Normark B, Achour A. The basic keratin 10-binding domain of the virulence-associated pneumococcal serine-rich protein PsrP adopts a novel MSCRAMM fold. Open Biol. 2014 Jan 15;4(1):130090. doi: 10.1098/rsob.130090. PMID:24430336 doi:http://dx.doi.org/10.1098/rsob.130090

3zgi, resolution 2.25Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA