3l0d: Difference between revisions

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{{STRUCTURE_3l0d|  PDB=3l0d  |  SCENE=  }}
==Crystal structure of glyceraldehyde-3-phosphate dehydrogenase from Bartonella henselae with bound NAD==
===Crystal structure of glyceraldehyde-3-phosphate dehydrogenase from Bartonella henselae with bound NAD===
<StructureSection load='3l0d' size='340' side='right' caption='[[3l0d]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
 
== Structural highlights ==
==About this Structure==
<table><tr><td colspan='2'>[[3l0d]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bartonella_henselae Bartonella henselae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3L0D OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3L0D FirstGlance]. <br>
[[3l0d]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bartonella_henselae Bartonella henselae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3L0D OCA].  
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3doc|3doc]], [[3gnq|3gnq]]</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">gap, BH15080 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=38323 Bartonella henselae])</td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Glyceraldehyde-3-phosphate_dehydrogenase_(phosphorylating) Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.2.1.12 1.2.1.12] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3l0d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3l0d OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3l0d RCSB], [http://www.ebi.ac.uk/pdbsum/3l0d PDBsum]</span></td></tr>
</table>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/l0/3l0d_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Bartonella henselae]]
[[Category: Bartonella henselae]]
[[Category: SSGCID, Seattle Structural Genomics Center for Infectious Disease.]]
[[Category: Structural genomic]]
[[Category: Als collaborative crystallography]]
[[Category: Als collaborative crystallography]]
[[Category: Bartonellosis]]
[[Category: Bartonellosis]]
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[[Category: Niaid]]
[[Category: Niaid]]
[[Category: Oxidoreductase]]
[[Category: Oxidoreductase]]
[[Category: Seattle structural genomics center for infectious disease]]
[[Category: Ssgcid]]
[[Category: Ssgcid]]
[[Category: Tick-transmitted pathogen]]
[[Category: Tick-transmitted pathogen]]

Revision as of 20:06, 18 December 2014

Crystal structure of glyceraldehyde-3-phosphate dehydrogenase from Bartonella henselae with bound NADCrystal structure of glyceraldehyde-3-phosphate dehydrogenase from Bartonella henselae with bound NAD

Structural highlights

3l0d is a 2 chain structure with sequence from Bartonella henselae. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:
Gene:gap, BH15080 (Bartonella henselae)
Activity:Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating), with EC number 1.2.1.12
Resources:FirstGlance, OCA, RCSB, PDBsum

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3l0d, resolution 2.50Å

Drag the structure with the mouse to rotate

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OCA