Pseudouridine synthase: Difference between revisions

Michal Harel (talk | contribs)
No edit summary
Michal Harel (talk | contribs)
No edit summary
Line 6: Line 6:


Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
{{#tree:id=OrganizedByTopic|openlevels=0|


===tRNA pseudouridine synthase===
*tRNA pseudouridine synthase


[[1dj0]] – EcPUS I – ''Escherichia coli''<BR />
**[[1dj0]] – EcPUS I – ''Escherichia coli''<BR />
[[1ze1]] – TmPUS B – ''Thermotoga maritima''<BR />
**[[1ksk]], [[1ksl]] – EcPUS RsuA<BR />   
[[1ksk]], [[1ksl]] – EcPUS RsuA<BR />   
**[[1vio]] - PUS RsuA – ''Haemophilus influenzae''<BR />
[[1vio]] - PUS RsuA – ''Haemophilus influenzae''<BR />
**[[1xpi]] - EcPUS RluC catalytic domain<BR />
[[1xpi]] - EcPUS RluC catalytic domain<BR />
**[[1v9k]] - EcPUS RluC C-terminal domain (mutant) <BR />
[[1v9k]] - EcPUS RluC C-terminal domain (mutant) <BR />
**[[2ist]] - EcPUS RluD <BR />
[[2ist]] - EcPUS RluD <BR />
**[[1prz]], [[1qyu]], [[1v9f]] - EcPUS RluD catalytic domain<BR />
[[1prz]], [[1qyu]], [[1v9f]] - EcPUS RluD catalytic domain<BR />
**[[2olw]] - EcPUS RluE<BR />
[[2olw]] - EcPUS RluE<BR />
**[[2oml]] - EcPUS RluE catalytic domain<BR />
[[2oml]] - EcPUS RluE catalytic domain<BR />
**[[2gml]] - EcPUS RluF catalytic domain<BR />
[[2gml]] - EcPUS RluF catalytic domain<BR />
**[[4iqm]], [[4its]], [[4j37]], [[4nz6]] - hPUS Pus1 catalytic domain - human<br />
[[4iqm]], [[4its]], [[4j37]], [[4nz6]] - hPUS Pus1 catalytic domain - human<br />
**[[4nz7]] - hPUS Pus1 catalytic domain (mutant)<br />
[[4nz7]] - hPUS Pus1 catalytic domain (mutant)<br />
**[[1vs3]] – PUS TruA – ''Thermus thermophilus''<BR />
[[1vs3]] – PUS TruA – ''Thermus thermophilus''<BR />
**[[1sgv]] – PUS TruB – ''Mycobacterium tuberculosis''<BR />
[[1sgv]] – PUS TruB – ''Mycobacterium tuberculosis''<BR />
**[[1si7]], [[1szw]], [[1sb7]] - EcPUS TruD
[[1si7]], [[1szw]], [[1sb7]] - EcPUS TruD


===PUS complex with RNA===
*tRNA pseudouridine synthase complex with RNA


[[1k8w]] – EcPUS B + stem-loop RNA<BR />   
**[[1k8w]] – EcPUS B + stem-loop RNA<BR />   
[[1zl3]] - EcPUS B (mutant) + stem-loop RNA<BR />  
**[[1zl3]] - EcPUS B (mutant) + stem-loop RNA<BR />  
[[2i82]] – EcPUS RluA + RNA<BR />  
**[[2i82]] – EcPUS RluA + RNA<BR />  
[[3dh3]] - EcPUS RluF + RNA<BR />  
**[[3dh3]] - EcPUS RluF + RNA<BR />  
[[2nqp]], [[2nr0]], [[2nre]] – EcPUS TruA + Leu-tRNA<BR />  
**[[2nqp]], [[2nr0]], [[2nre]] – EcPUS TruA + Leu-tRNA<BR />  
[[3hjw]], [[3lwo]], [[3lwp]], [[3lwq]], [[3lwr]], [[3lwv]] – PfPUS Cbf5 + ribosome biogenesis protein Nop10 + ribosomal protein L7 + RNA  – ''Pyrococcus furiosus''<BR />
**[[3hjw]], [[3lwo]], [[3lwp]], [[3lwq]], [[3lwr]], [[3lwv]] – PfPUS Cbf5 + ribosome biogenesis protein Nop10 + ribosomal protein L7 + RNA  – ''Pyrococcus furiosus''<BR />
[[3mqk]] - PfPUS Cbf5 + ribosome biogenesis protein Nop10 + small nuclear RNP Gar1-like protein + RNA<BR />  
**[[3mqk]] - PfPUS Cbf5 + ribosome biogenesis protein Nop10 + small nuclear RNP Gar1-like protein + RNA<BR />  
[[3hjy]] - PfPUS Cbf5 + ribosome biogenesis protein NOP10 + RNA<BR />  
**[[3hjy]] - PfPUS Cbf5 + ribosome biogenesis protein NOP10 + RNA<BR />  
[[1ze2]] - TmPUS B + RNA<BR />  
**[[1ze2]] - TmPUS B + RNA<BR />  
[[2ab4]] - TmPUS B (mutant) + RNA<BR />  
**[[2ab4]] - TmPUS B (mutant) + RNA<BR />  
[[1r3e]], [[1r3f]] - EcPUS B + RNA<BR />  
**[[1r3e]], [[1r3f]] - EcPUS B + RNA<BR />  


===PPUS===
*Probable tRNA pseudouridine synthase
 
[[2apo]] – PPUS + ribosome biogenesis protein Nop10 – ''Methanocaldococcus jannaschii''<br />
[[2ey4]] - PfPPUS Cbf5 + ribosome biogenesis protein Nop10 + small nucleolar RNP <br />
[[2hvy]], [[3hax]] - PfPPUS B + ribosome biogenesis protein Nop10 + ribosomal protein L7 + RNA<br />
[[2rfk]] - PfPUS B + ribosome biogenesis protein Nop10 + small nucleolar RNP + RNA<br />
[[3hay]] - PfPPUS B + ribosome biogenesis protein Nop10 + ribosomal protein L7 + small nucleolar RNP + RNA<br />
[[2aus]] – PPUS B + ribosome biogenesis protein Nop10 – ''Pyrococcus abyssi''<br />
[[1z2z]] – PPUS D – ''Methanosarcina mazei''<br />


**[[2apo]] – PPUS + ribosome biogenesis protein Nop10 – ''Methanocaldococcus jannaschii''<br />
**[[2ey4]] - PfPPUS Cbf5 + ribosome biogenesis protein Nop10 + small nucleolar RNP <br />
**[[2hvy]], [[3hax]] - PfPPUS B + ribosome biogenesis protein Nop10 + ribosomal protein L7 + RNA<br />
**[[2rfk]] - PfPUS B + ribosome biogenesis protein Nop10 + small nucleolar RNP + RNA<br />
**[[3hay]] - PfPPUS B + ribosome biogenesis protein Nop10 + ribosomal protein L7 + small nucleolar RNP + RNA<br />
**[[2aus]] – PPUS B + ribosome biogenesis protein Nop10 – ''Pyrococcus abyssi''<br />
**[[1z2z]] – PPUS D – ''Methanosarcina mazei''<br />
}}


[[Category:Topic Page]]
[[Category:Topic Page]]

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Alexander Berchansky, Jaime Prilusky, Wayne Decatur, Angel Herraez