2w1j: Difference between revisions

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[[Image:2w1j.png|left|200px]]
==CRYSTAL STRUCTURE OF SORTASE C-1 (SRTC-1) from Streptococcus pneumoniae==
<StructureSection load='2w1j' size='340' side='right' caption='[[2w1j]], [[Resolution|resolution]] 1.24&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[2w1j]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Streptococcus_pneumoniae_tigr4 Streptococcus pneumoniae tigr4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2W1J OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2W1J FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2w1k|2w1k]]</td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Peptidyltransferase Peptidyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.3.2.12 2.3.2.12] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2w1j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2w1j OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2w1j RCSB], [http://www.ebi.ac.uk/pdbsum/2w1j PDBsum]</span></td></tr>
</table>
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
Streptococcus pneumoniae is a piliated pathogen whose ability to circumvent vaccination and antibiotic treatment strategies is a cause of mortality worldwide. Pili play important roles in pneumococcal infection, but little is known about their biogenesis mechanism or the relationship between components of the pilus-forming machinery, which includes the fiber pilin (RrgB), two minor pilins (RrgA, RrgC), and three sortases (SrtC-1, SrtC-2, SrtC-3). Here we show that SrtC-1 is the main pilus-polymerizing transpeptidase, and electron microscopy analyses of RrgB fibers reconstituted in vitro reveal that they structurally mimic the pneumococcal pilus backbone. Crystal structures of both SrtC-1 and SrtC-3 reveal active sites whose access is controlled by flexible lids, unlike in non-pilus sortases, and suggest that substrate specificity is dictated by surface recognition coupled to lid opening. The distinct structural features of pilus-forming sortases suggest a common pilus biogenesis mechanism that could be exploited for the development of broad-spectrum antibacterials.


{{STRUCTURE_2w1j|  PDB=2w1j  |  SCENE=  }}
Sortase-Mediated Pilus Fiber Biogenesis in Streptococcus pneumoniae.,Manzano C, Contreras-Martel C, El Mortaji L, Izore T, Fenel D, Vernet T, Schoehn G, Di Guilmi AM, Dessen A Structure. 2008 Dec 12;16(12):1838-48. PMID:19081060<ref>PMID:19081060</ref>


===CRYSTAL STRUCTURE OF SORTASE C-1 (SRTC-1) from Streptococcus pneumoniae===
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 
</div>
{{ABSTRACT_PUBMED_19081060}}
== References ==
 
<references/>
==About this Structure==
__TOC__
[[2w1j]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Streptococcus_pneumoniae_tigr4 Streptococcus pneumoniae tigr4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2W1J OCA].
</StructureSection>
 
==Reference==
<ref group="xtra">PMID:019081060</ref><references group="xtra"/>
[[Category: Peptidyltransferase]]
[[Category: Peptidyltransferase]]
[[Category: Streptococcus pneumoniae tigr4]]
[[Category: Streptococcus pneumoniae tigr4]]
[[Category: Contreras-Martel, C.]]
[[Category: Contreras-Martel, C]]
[[Category: Dessen, A.]]
[[Category: Dessen, A]]
[[Category: Fenel, D.]]
[[Category: Fenel, D]]
[[Category: Guilmi, A M.Di.]]
[[Category: Guilmi, A M.Di]]
[[Category: Izore, T.]]
[[Category: Izore, T]]
[[Category: Manzano, C.]]
[[Category: Manzano, C]]
[[Category: Mortaji, L El.]]
[[Category: Mortaji, L El]]
[[Category: Schoehn, G.]]
[[Category: Schoehn, G]]
[[Category: Vernet, T.]]
[[Category: Vernet, T]]
[[Category: Pathogenicity]]
[[Category: Pathogenicity]]
[[Category: Transferase]]
[[Category: Transferase]]

Revision as of 11:54, 8 December 2014

CRYSTAL STRUCTURE OF SORTASE C-1 (SRTC-1) from Streptococcus pneumoniaeCRYSTAL STRUCTURE OF SORTASE C-1 (SRTC-1) from Streptococcus pneumoniae

Structural highlights

2w1j is a 2 chain structure with sequence from Streptococcus pneumoniae tigr4. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:
Activity:Peptidyltransferase, with EC number 2.3.2.12
Resources:FirstGlance, OCA, RCSB, PDBsum

Publication Abstract from PubMed

Streptococcus pneumoniae is a piliated pathogen whose ability to circumvent vaccination and antibiotic treatment strategies is a cause of mortality worldwide. Pili play important roles in pneumococcal infection, but little is known about their biogenesis mechanism or the relationship between components of the pilus-forming machinery, which includes the fiber pilin (RrgB), two minor pilins (RrgA, RrgC), and three sortases (SrtC-1, SrtC-2, SrtC-3). Here we show that SrtC-1 is the main pilus-polymerizing transpeptidase, and electron microscopy analyses of RrgB fibers reconstituted in vitro reveal that they structurally mimic the pneumococcal pilus backbone. Crystal structures of both SrtC-1 and SrtC-3 reveal active sites whose access is controlled by flexible lids, unlike in non-pilus sortases, and suggest that substrate specificity is dictated by surface recognition coupled to lid opening. The distinct structural features of pilus-forming sortases suggest a common pilus biogenesis mechanism that could be exploited for the development of broad-spectrum antibacterials.

Sortase-Mediated Pilus Fiber Biogenesis in Streptococcus pneumoniae.,Manzano C, Contreras-Martel C, El Mortaji L, Izore T, Fenel D, Vernet T, Schoehn G, Di Guilmi AM, Dessen A Structure. 2008 Dec 12;16(12):1838-48. PMID:19081060[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

  1. Manzano C, Contreras-Martel C, El Mortaji L, Izore T, Fenel D, Vernet T, Schoehn G, Di Guilmi AM, Dessen A. Sortase-Mediated Pilus Fiber Biogenesis in Streptococcus pneumoniae. Structure. 2008 Dec 12;16(12):1838-48. PMID:19081060 doi:S0969-2126(08)00385-7

2w1j, resolution 1.24Å

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