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Glyceraldehyde-3-Phosphate Dehydrogenase: Difference between revisions

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Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
{{#tree:id=OrganizedByTopic|openlevels=0|


===Apo GAPDH===
*Apo GAPDH


[[1vsu]] – CpGAPDH – ''Cryptosporidium parvum''<br />
**[[1vsu]] – CpGAPDH – ''Cryptosporidium parvum''<br />
[[1dc5]] - EcGAPDH – ''Escherichia coli''<br />
**[[1dc5]] - EcGAPDH – ''Escherichia coli''<br />
[[1euh]], [[1qi6]] - SmGAPDH – ''Streptococcus mutans''<br />
**[[1euh]], [[1qi6]] - SmGAPDH – ''Streptococcus mutans''<br />
[[2hki]] – sGAPDH – spinach<br />
**[[2hki]] – sGAPDH – spinach<br />
[[3e6a]] – RiGAPDH ligand binding domain – rice<br />
**[[3e6a]] – RiGAPDH ligand binding domain – rice<br />
[[3lc7]] - SaGAPDH – ''Staphylococcus aureus''<br />
**[[3lc7]] - SaGAPDH – ''Staphylococcus aureus''<br />
[[3pqa]] – MjGAPDH – ''Methanocaldococcus jannaschii''<br />
**[[3pqa]] – MjGAPDH – ''Methanocaldococcus jannaschii''<br />
[[3prl]] – BhGAPDH – ''Bacillus halodurans''<br />
**[[3prl]] – BhGAPDH – ''Bacillus halodurans''<br />


===NAD-dependent GAPDH with cofactor NAD===
*NAD-dependent GAPDH with cofactor NAD


[[1vsv]] – CpGAPDH + NAD<br />
**[[1vsv]] – CpGAPDH + NAD<br />
[[1gpd]] – GAPDH + NAD – American lobster<br />
**[[1gpd]] – GAPDH + NAD – American lobster<br />
[[3gpd]], [[1znq]], [[1u8f]] - GAPDH + NAD – human<br />
**[[3gpd]], [[1znq]], [[1u8f]] - GAPDH + NAD – human<br />
[[2vyn]], [[2vyv]] - GAPDH + NAD - rat<br />
**[[2vyn]], [[2vyv]] - GAPDH + NAD - rat<br />
[[1gd1]], [[3cmc]] – GsGAPDH + NAD – ''Geobacillus stearothermophilus''<br />
**[[1gd1]], [[3cmc]] – GsGAPDH + NAD – ''Geobacillus stearothermophilus''<br />
[[1dbv]], [[3dbv]] - GsGAPDH (mutant) + NAD<br />
**[[1dbv]], [[3dbv]] - GsGAPDH (mutant) + NAD<br />
[[1hdg]] - GAPDH + NAD – ''Thermotoga maritima''<br />
**[[1hdg]] - GAPDH + NAD – ''Thermotoga maritima''<br />
[[1gyp]], [[1a7k]] - GAPDH + NAD – ''Leishmania mexicana''<br />
**[[1gyp]], [[1a7k]] - GAPDH + NAD – ''Leishmania mexicana''<br />
[[1gyq]] - LmGAPDH + benzyl-NAD<br />
**[[1gyq]] - LmGAPDH + benzyl-NAD<br />
[[1cer]], [[2g82]] - GAPDH + NAD – ''Thermus aquaticus''<br />
**[[1cer]], [[2g82]] - GAPDH + NAD – ''Thermus aquaticus''<br />
[[1gad]], [[1dc6]] - EcGAPDH + NAD<br />
**[[1gad]], [[1dc6]] - EcGAPDH + NAD<br />
[[1gae]] - EcGAPDH (mutant) + NAD<br />
**[[1gae]] - EcGAPDH (mutant) + NAD<br />
[[2ep7]] – GAPDH + NAD – ''Aquifex aeolicus''<br />
**[[2ep7]] – GAPDH + NAD – ''Aquifex aeolicus''<br />
[[1nbo]] - sGAPDH + NAD<br />
**[[1nbo]] - sGAPDH + NAD<br />
[[1j0x]] - GAPDH + NAD – rabbit<br />
**[[1j0x]] - GAPDH + NAD – rabbit<br />
[[2b4r]], [[1ywg]] - PfGAPDH + NAD – ''Plasmodium falciparum''<br />
**[[2b4r]], [[1ywg]] - PfGAPDH + NAD – ''Plasmodium falciparum''<br />
[[2b4t]] - PfGAPDH (mutant) + NAD<br />
**[[2b4t]] - PfGAPDH (mutant) + NAD<br />
[[2czc]] - GAPDH + NAD – ''Pyrococcus horikoshii''<br />
**[[2czc]] - GAPDH + NAD – ''Pyrococcus horikoshii''<br />
[[2i5p]] - GAPDH + NAD – ''Kluyveromyces marxianus''<br />
**[[2i5p]] - GAPDH + NAD – ''Kluyveromyces marxianus''<br />
[[3gnq]] - GAPDH + NAD – ''Burkholderia pseudomallei''<br />
**[[3gnq]] - GAPDH + NAD – ''Burkholderia pseudomallei''<br />
[[3hja]] - GAPDH + NAD – ''Borrelia burgdorferi''<br />
**[[3hja]] - GAPDH + NAD – ''Borrelia burgdorferi''<br />
[[3e5r]] - RiGAPDH + NAD<br />
**[[3e5r]] - RiGAPDH + NAD<br />
[[2x0n]] – GAPDH + NAD – ''Trypanosoma brucei'' – Laue<br />
**[[2x0n]] – GAPDH + NAD – ''Trypanosoma brucei'' – Laue<br />
[[3k2b]] -  GAPDH + NAD – ''Arabidopsis thaliana''<br />
**[[3k2b]] -  GAPDH + NAD – ''Arabidopsis thaliana''<br />
[[3hq4]], [[3k9q]], [[3ksd]], [[3lc1]] - SaGAPDH (mutant) + NAD<br />
**[[3hq4]], [[3k9q]], [[3ksd]], [[3lc1]] - SaGAPDH (mutant) + NAD<br />
[[3lvf]] - SaGAPDH + NAD<br />
**[[3lvf]] - SaGAPDH + NAD<br />
[[3pfw]] - hGAPDH + NAD – human<br />
**[[3pfw]] - hGAPDH + NAD – human<br />
[[3sth]] - GAPDH + NAD – ''Toxoplasma gondii''<br />
**[[3sth]] - GAPDH + NAD – ''Toxoplasma gondii''<br />
[[3pym]] - GAPDH + NAD – yeast<br />
**[[3pym]] - GAPDH + NAD – yeast<br />


===NAD-dependent GAPDH ternary complexes containing glyceraldehyde-3-phosphate (G3P)===
*NAD-dependent GAPDH ternary complexes containing glyceraldehyde-3-phosphate (G3P)


[[3cif]] - CpGAPDH (mutant) + NAD + G3P<br />
**[[3cif]] - CpGAPDH (mutant) + NAD + G3P<br />
[[3ksz]], [[3l4s]] - SaGAPDH (mutant) + NAD + G3P<br />
**[[3ksz]], [[3l4s]] - SaGAPDH (mutant) + NAD + G3P<br />


===Other NAD-dependent GAPDH ternary complexes===
*Other NAD-dependent GAPDH ternary complexes


[[3dmt]], [[3ids]] - TcGAPDH  + NAD + inhibitor<br />
**[[3dmt]], [[3ids]] - TcGAPDH  + NAD + inhibitor<br />
[[3h9e]] - hGAPDH + NAD + phosphate<br />
**[[3h9e]] - hGAPDH + NAD + phosphate<br />
[[3k73]], [[3l6o]] - SaGAPDH + NAD + phosphate<br />
**[[3k73]], [[3l6o]] - SaGAPDH + NAD + phosphate<br />
[[1uxt]] - TtGAPDH (mutant) + NAD + G1P<br />
**[[1uxt]] - TtGAPDH (mutant) + NAD + G1P<br />
[[3b1j]], [[3b1k]] - GAPDH + NAD + CP12 – ''Synechococcus elongatus''<br />
**[[3b1j]], [[3b1k]] - GAPDH + NAD + CP12 – ''Synechococcus elongatus''<br />


===NADP-dependent GAPDH with cofactor NADP===
*NADP-dependent GAPDH with cofactor NADP


[[2dbv]], [[4dbv]] - GsGAPDH (mutant) + NADP<br />
**[[2dbv]], [[4dbv]] - GsGAPDH (mutant) + NADP<br />
[[2yyy]] - MjGAPDH + NADP<br />
**[[2yyy]] - MjGAPDH + NADP<br />
[[2euh]] - SmGAPDH + NADP<br />
**[[2euh]] - SmGAPDH + NADP<br />
[[2id2]] - SmGAPDH (mutant) + NADP<br />
**[[2id2]] - SmGAPDH (mutant) + NADP<br />
[[1cf2]] - GAPDH + NADP – ''Methanothermus fervidus''<br />
**[[1cf2]] - GAPDH + NADP – ''Methanothermus fervidus''<br />
[[1jn0]], [[1rm4]], [[2pkq]], [[2pkr]] - sGAPDH  + NADP<br />
**[[1jn0]], [[1rm4]], [[2pkq]], [[2pkr]] - sGAPDH  + NADP<br />
[[1rm3]], [[1rm5]] - sGAPDH (mutant) + NADP<br />
**[[1rm3]], [[1rm5]] - sGAPDH (mutant) + NADP<br />
[[1ky8]] - TtGAPDH + NADP – ''Thermoproteus tenax''<br />
**[[1ky8]] - TtGAPDH + NADP – ''Thermoproteus tenax''<br />
[[3rhh]] - BhGAPDH + NADP<br />
**[[3rhh]] - BhGAPDH + NADP<br />


===NADP-dependent GAPDH ternary complexes containing glyceraldehyde-3-phosphate (G3P)===
*NADP-dependent GAPDH ternary complexes containing glyceraldehyde-3-phosphate (G3P)


[[1qi1]] - SmGAPDH + NADP + G3P<br />
**[[1qi1]] - SmGAPDH + NADP + G3P<br />
[[2esd]], [[2qe0]] - SmGAPDH (mutant) + NADP + G3P<br />
**[[2esd]], [[2qe0]] - SmGAPDH (mutant) + NADP + G3P<br />
[[3lc2]] – SaGAPDH-thioacyl + G3P<br />
**[[3lc2]] – SaGAPDH-thioacyl + G3P<br />
[[1uxu]] - TtGAPDH (mutant) + NADP + AMP + G3P<br />
**[[1uxu]] - TtGAPDH (mutant) + NADP + AMP + G3P<br />


===Other NADP-dependent GAPDH ternary complexes===
*Other NADP-dependent GAPDH ternary complexes
 
[[1k3t]] - TcGAPDH  + coumarin derivative – ''Trypanosoma cruzi''<br />
[[1uxv]] - TtGAPDH + NADP + AMP<br />
[[1uxp]] - TtGAPDH (mutant) + NADP + ADP<br />
[[1uxq]] - TtGAPDH (mutant) + NADP + G1P<br />
[[1uxr]] - TtGAPDH (mutant) + NADP + F6P<br />


**[[1k3t]] - TcGAPDH  + coumarin derivative – ''Trypanosoma cruzi''<br />
**[[1uxv]] - TtGAPDH + NADP + AMP<br />
**[[1uxp]] - TtGAPDH (mutant) + NADP + ADP<br />
**[[1uxq]] - TtGAPDH (mutant) + NADP + G1P<br />
**[[1uxr]] - TtGAPDH (mutant) + NADP + F6P<br />
}}
==References==
==References==


Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

Nathan Line, David Canner, Andrew Swart, Alice Harmon, Michal Harel, Alexander Berchansky
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