3fg8: Difference between revisions

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OCA

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-[[Image:3fg8.png|left|200px]]
+==Crystal structure of PAS domain of RHA05790==
+<StructureSection load='3fg8' size='340' side='right' caption='[[3fg8]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-{{STRUCTURE_3fg8|  PDB=3fg8  |  SCENE=  }}
+== Structural highlights ==
+<table><tr><td colspan='2'>[[3fg8]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhodococcus_jostii_rha1 Rhodococcus jostii rha1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FG8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3FG8 FirstGlance]. <br>
-===Crystal structure of PAS domain of RHA05790===
+</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=3PB:(3R)-3-(PHOSPHONOOXY)BUTANOIC+ACID'>3PB</scene></td></tr>
+<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RHA1_ro04714 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=101510 Rhodococcus jostii RHA1])</td></tr>
-==About this Structure==
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3fg8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fg8 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3fg8 RCSB], [http://www.ebi.ac.uk/pdbsum/3fg8 PDBsum], [http://www.topsan.org/Proteins/MCSG/3fg8 TOPSAN]</span></td></tr>
-[[3fg8]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhodococcus_jostii_rha1 Rhodococcus jostii rha1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FG8 OCA].
+</table>
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fg/3fg8_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+<div style="clear:both"></div>
+__TOC__
+</StructureSection>
 [[Category: Rhodococcus jostii rha1]]
-[[Category: Chang, C.]]
+[[Category: Chang, C]]
-[[Category: Cui, H.]]
+[[Category: Cui, H]]
-[[Category: Edwards, A.]]
+[[Category: Edwards, A]]
-[[Category: Joachimiak, A.]]
+[[Category: Joachimiak, A]]
-[[Category: MCSG, Midwest Center for Structural Genomics.]]
+[[Category: Structural genomic]]
-[[Category: Savchenko, A.]]
+[[Category: Savchenko, A]]
-[[Category: Xu, X.]]
+[[Category: Xu, X]]
 [[Category: Mcsg]]
-[[Category: Midwest center for structural genomic]]
 [[Category: Pas domain]]
-[[Category: Protein structure initiative]]
+[[Category: PSI, Protein structure initiative]]
-[[Category: Psi-2]]
-[[Category: Structural genomic]]
 [[Category: Uncharacterized protein]]
 [[Category: Unknown function]]