3fdi: Difference between revisions

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[[Image:3fdi.png|left|200px]]
==Crystal structure of uncharacterized protein from Eubacterium ventriosum ATCC 27560.==
 
<StructureSection load='3fdi' size='340' side='right' caption='[[3fdi]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
{{STRUCTURE_3fdi|  PDB=3fdi  |  SCENE=  }}
== Structural highlights ==
 
<table><tr><td colspan='2'>[[3fdi]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Eubacterium_ventriosum Eubacterium ventriosum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FDI OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3FDI FirstGlance]. <br>
===Crystal structure of uncharacterized protein from Eubacterium ventriosum ATCC 27560.===
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
 
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
 
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">EUBVEN_02315 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=39496 Eubacterium ventriosum])</td></tr>
==About this Structure==
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3fdi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fdi OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3fdi RCSB], [http://www.ebi.ac.uk/pdbsum/3fdi PDBsum], [http://www.topsan.org/Proteins/MCSG/3fdi TOPSAN]</span></td></tr>
[[3fdi]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Eubacterium_ventriosum Eubacterium ventriosum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FDI OCA].  
</table>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fd/3fdi_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Eubacterium ventriosum]]
[[Category: Eubacterium ventriosum]]
[[Category: Jedrzejczak, R.]]
[[Category: Jedrzejczak, R]]
[[Category: Joachimiak, A.]]
[[Category: Joachimiak, A]]
[[Category: Keigher, L.]]
[[Category: Keigher, L]]
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[[Category: Structural genomic]]
[[Category: Nocek, B.]]
[[Category: Nocek, B]]
[[Category: Cytidylate kinase like protein]]
[[Category: Cytidylate kinase like protein]]
[[Category: Mcsg]]
[[Category: Mcsg]]
[[Category: Midwest center for structural genomic]]
[[Category: Prk04182 class member]]
[[Category: Prk04182 class member]]
[[Category: Protein structure initiative]]
[[Category: PSI, Protein structure initiative]]
[[Category: Psi]]
[[Category: Structural genomic]]
[[Category: Unknown function]]
[[Category: Unknown function]]

Revision as of 11:52, 26 November 2014

Crystal structure of uncharacterized protein from Eubacterium ventriosum ATCC 27560.Crystal structure of uncharacterized protein from Eubacterium ventriosum ATCC 27560.

Structural highlights

3fdi is a 2 chain structure with sequence from Eubacterium ventriosum. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:,
NonStd Res:
Gene:EUBVEN_02315 (Eubacterium ventriosum)
Resources:FirstGlance, OCA, RCSB, PDBsum, TOPSAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3fdi, resolution 2.20Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA