Ferritin: Difference between revisions

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

David Canner, Eran Hodis, Alexander Berchansky, Michal Harel, Joel L. Sussman

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 <applet load='Pdb2jd7.pdb' size='400' frame='true' align='right' scene="Ferritin/Starting_ferritin_scene/1" caption="Crystal structure of Fe-soaked ferritin from the hyperthermophilic archael anaerobe ''Pyrococcus furiousus'', [[2jd7]]" />
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 Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
+{{#tree:id=OrganizedByTopic|openlevels=0|
-===Ferritin===
+*Ferritin
-[[2jd6]], [[2jd7]] – PfFR - ''Pyrococcus furiosus'' <br />
-[[2jd8]] – PfFR+Zn<br />
-[[3kxu]] – hFR (mutant) – human<br />
-[[3hx2]], [[3hx5]], [[3hx7]], [[1fha]] - hFR<br />
-[[3a68]] – soFR from gene SferH4 – soybean<br />
-[[3a9q]] - soFR from gene SferH4 (mutant) <br />
-[[3egm]], [[3bvf]], [[3bvi]], [[3bvk]], [[3bvl]] – HpFR – ''Heliobacter pylori''<br />
-[[3e6s]] - PnFR – Pseudo-nitzschia<br />
-[[1z4a]], [[1vlg]] – FR – ''Thermotoga maritime''<br />
-[[1s3q]], [[1sq3]], [[3kx9]] – FR – ''Archaeoglubus fulgidus''<br />
-[[1krq]] – FR – ''Campylobacter jejuni''<br />
-[[1eum]]  - EcFR – ''Escherichia coli''<br />
-[[1qgh]] – LiFR - ''Listeria innocua''<br />
-[[1mfr]], [[1bg7]], [[3ka3]], [[3ka4]], [[3rbc]], [[3re7]], [[3rgd]], [[4das]] – bFR - Bullfrog<br />
-[[3ka6]], [[3ka8]], [[3ka9]] – bFR (mutant)+Co<br />
-[[3se1]], [[3sh6]], [[3shx]] - bFR (mutant) + Mg<br />
-[[3qz3]] - VcFR – ''Vibrio cholerae''<br / >
-[[3vnx]] – FR – ''Ulva pertusa''<br />
-[[4ism]], [[4isp]], [[4itt]], [[4itw]], [[4iwj]], [[4iwk]], [[4ixk]] – FR – ''Pseudo-nitschia multiseries''<br />
-[[1z6o]] – FTH – ''Trichoplusia ni''<br />
-===Ferritin light chain (FTL) ===
+**[[2jd6]], [[2jd7]] – PfFR - ''Pyrococcus furiosus'' <br />
+**[[2jd8]] – PfFR+Zn<br />
+**[[3kxu]] – hFR (mutant) – human<br />
+**[[3hx2]], [[3hx5]], [[3hx7]], [[1fha]] - hFR<br />
+**[[3a68]] – soFR from gene SferH4 – soybean<br />
+**[[3a9q]] - soFR from gene SferH4 (mutant) <br />
+**[[3egm]], [[3bvf]], [[3bvi]], [[3bvk]], [[3bvl]] – HpFR – ''Heliobacter pylori''<br />
+**[[3e6s]] - PnFR – Pseudo-nitzschia<br />
+**[[1z4a]], [[1vlg]] – FR – ''Thermotoga maritime''<br />
+**[[1s3q]], [[1sq3]], [[3kx9]] – FR – ''Archaeoglubus fulgidus''<br />
+**[[1krq]] – FR – ''Campylobacter jejuni''<br />
+**[[1eum]]  - EcFR – ''Escherichia coli''<br />
+**[[1qgh]] – LiFR - ''Listeria innocua''<br />
+**[[1mfr]], [[1bg7]], [[3ka3]], [[3ka4]], [[3rbc]], [[3re7]], [[3rgd]], [[4das]] – bFR - Bullfrog<br />
+**[[3ka6]], [[3ka8]], [[3ka9]] – bFR (mutant)+Co<br />
+**[[3se1]], [[3sh6]], [[3shx]] - bFR (mutant) + Mg<br />
+**[[3qz3]] - VcFR – ''Vibrio cholerae''<br / >
+**[[3vnx]] – FR – ''Ulva pertusa''<br />
+**[[4ism]], [[4isp]], [[4itt]], [[4itw]], [[4iwj]], [[4iwk]], [[4ixk]] – FR – ''Pseudo-nitschia multiseries''<br />
+**[[1z6o]] – FTH – ''Trichoplusia ni''<br />
-[[1lb3]], [[1h96]] – FTL – mouse<br />
+*Ferritin light chain (FTL)
-[[1rcc]], [[1rcd]], [[1rci]] – bFTL+tartrate+Mg<br />
-[[1rce]], [[1rcg]] - bFTL+tartrate+Mn<br />
-[[3noz]], [[3np0]], [[3np2]], [[3o7r]] – hoFTL (mutant) - horse<br />
-[[3o7s]], [[3u90]] - hoFTL<br />
-[[3rav]], [[3rd0]] – hoFTL + barbiturate
-===Ferritin heavy chain (FTH) ===
+**[[1lb3]], [[1h96]] – FTL – mouse<br />
+**[[1rcc]], [[1rcd]], [[1rci]] – bFTL+tartrate+Mg<br />
+**[[1rce]], [[1rcg]] - bFTL+tartrate+Mn<br />
+**[[3noz]], [[3np0]], [[3np2]], [[3o7r]] – hoFTL (mutant) - horse<br />
+**[[3o7s]], [[3u90]] - hoFTL<br />
+**[[3rav]], [[3rd0]] – hoFTL + barbiturate
-[[2z6m]], [[1r03]], [[2fha]], [[3ajo]] – hFTH<br />
+*Ferritin heavy chain (FTH)
-[[3ajp]], [[3ajq]], [[4dyx]], [[4dyy]], [[4dyz]], [[4dz0]] - hFTH (mutant)<br />
-===apo-ferritin (apo-FR) ===
+**[[2z6m]], [[1r03]], [[2fha]], [[3ajo]] – hFTH<br />
+**[[3ajp]], [[3ajq]], [[4dyx]], [[4dyy]], [[4dyz]], [[4dz0]] - hFTH (mutant)<br />
-[[2x17]] – apo-PfFR+Ag <br />
+*apo-ferritin (apo-FR)
-[[3h7g]] – apo-hoFR+Au <br />
-[[1hrs]] - apo-hoFR+protoporphyrin<br />
-[[3bve]] – apo-HpFR<br />
-[[3e6r]] – apo-PnFR <br />
-[[2clu]], [[2cn6]] - apo-hFR (mutant)+Zn<br />
-===apo-ferritin light chain (apo-FTL) ===
+**[[2x17]] – apo-PfFR+Ag <br />
+**[[3h7g]] – apo-hoFR+Au <br />
+**[[1hrs]] - apo-hoFR+protoporphyrin<br />
+**[[3bve]] – apo-HpFR<br />
+**[[3e6r]] – apo-PnFR <br />
+**[[2clu]], [[2cn6]] - apo-hFR (mutant)+Zn<br />
-[[2zg7]], [[2z5p]], [[2z5q]], [[2z5r]], [[3fi6]], [[3af7]] – apo-hoFTL+Pd<br />
+*apo-ferritin light chain (apo-FTL)
-[[2zg8]], [[2zg9]], [[3af8]], [[3af9]]  - apo-hoFTL (mutant)+Pd<br />
-[[3f33]], [[3f34]], [[3f35]], [[3f36]], [[3f37]], [[3f38]], [[3f39]] - apo-hoFTL+phenols<br />
-[[2v2i]], [[2v2j]] - apo-hoFTL+haemin<br />
-[[2gyd]] - apo-hoFTL+diaziflurane<br />
-[[1xz1]] - apo-hoFTL+halothane<br />
-[[1xz3]] - apo-hoFTL+isoflurane<br />
-[[1gwg]] - apo-hoFTL+I3<br />
-[[2v2l]], [[2v2m]], [[2v2n]], [[2v2o]], [[2v2p]], [[2v2r]], [[2v2s]] - apo-hoFTL (mutant)+haemin<br />
-[[2za6]], [[2g4h]], [[1aew]], [[1dat]], [[1ier]], [[1ies]], [[3f32]], [[2zur]], [[2w0o]] - apo-hoFTL<br />
-[[2ffx]], [[2fg4]], [[2fg8]] – apo-hFTL<br />
-[[4de6]] - apo-hoFTL + arachidonic acid
-===apo-ferritin heavy chain (apo-FTH) ===
+**[[2zg7]], [[2z5p]], [[2z5q]], [[2z5r]], [[3fi6]], [[3af7]] – apo-hoFTL+Pd<br />
+**[[2zg8]], [[2zg9]], [[3af8]], [[3af9]]  - apo-hoFTL (mutant)+Pd<br />
+**[[3f33]], [[3f34]], [[3f35]], [[3f36]], [[3f37]], [[3f38]], [[3f39]] - apo-hoFTL+phenols<br />
+**[[2v2i]], [[2v2j]] - apo-hoFTL+haemin<br />
+**[[2gyd]] - apo-hoFTL+diaziflurane<br />
+**[[1xz1]] - apo-hoFTL+halothane<br />
+**[[1xz3]] - apo-hoFTL+isoflurane<br />
+**[[1gwg]] - apo-hoFTL+I3<br />
+**[[2v2l]], [[2v2m]], [[2v2n]], [[2v2o]], [[2v2p]], [[2v2r]], [[2v2s]] - apo-hoFTL (mutant)+haemin<br />
+**[[2za6]], [[2g4h]], [[1aew]], [[1dat]], [[1ier]], [[1ies]], [[3f32]], [[2zur]], [[2w0o]] - apo-hoFTL<br />
+**[[2ffx]], [[2fg4]], [[2fg8]] – apo-hFTL<br />
+**[[4de6]] - apo-hoFTL + arachidonic acid
-[[2za7]], [[2za8]], [[2cn7]], [[2chi]], [[2clu]] - apo-hoFTH (mutant) <br />
+*apo-ferritin heavy chain (apo-FTH)
-[[2cei]], [[2cih]], [[2cn6]], [[2iu2]] - apo-hoFTH (mutant)+Zn<br />
-[[3erz]] – apo-hFR+Hg<br />
-[[3es3]] - apo-hFR+Au<br />
-===Bacterioferritin (BFR) ===
+**[[2za7]], [[2za8]], [[2cn7]], [[2chi]], [[2clu]] - apo-hoFTH (mutant) <br />
+**[[2cei]], [[2cih]], [[2cn6]], [[2iu2]] - apo-hoFTH (mutant)+Zn<br />
+**[[3erz]] – apo-hFR+Hg<br />
+**[[3es3]] - apo-hFR+Au<br />
-[[3gvy]] – BFR – ''Rhodobacter sphaeroides''<br />
+*Bacterioferritin (BFR)
-[[1jgc]] - BFR – ''Rhodobacter capsulatus''<br />
-[[1ji4]] – BFR – ''Helicobacter pylori''<br />
-[[1nf4]], [[1nf6]], [[1nfv]] – BFR – ''Desulfovibrio desulfuricans''<br />
-[[3fvb]] – BmBFR - ''Brucelia melitensis''<br />
-[[2fkz]], [[2fl0]], [[1sof]] – BFR – ''Azotobacrter vinelandii''<br />
-[[2wtl]], [[3qb9]], [[3uof]], [[3uoi]] – BFR – ''Mycobacterium tuberculosis''<br />
-[[3bkn]] - MsBFR – ''Mycobacterium smegmatis''<br />
-[[3is7]], [[3is8]], [[3ise]], [[3isf]], [[3r2h]], [[3r2k]], [[3r2l]], [[3r2m]], [[3r2o]], [[3r2r]], [[3r2s]] – BFR – ''Pseudomonas aeruginosa''<br />
-[[1bfr]], [[1bcf]], [[2htn]], [[2vxi]], [[3e1j]], [[3e1l]], [[3e1m]], [[3e1n]], [[3e1p]], [[3e1o]], [[3e1q]], [[2y3q]]  – EcBFR <br />
-[[3e2c]], [[3ghq]] – EcBFR (mutant)<br />
-[[4am2]], [[4am4]], [[4am5]] – BFR – ''Blastochloris viridis''
-===Thioferritin (TFR) ===
+**[[3gvy]] – BFR – ''Rhodobacter sphaeroides''<br />
+**[[1jgc]] - BFR – ''Rhodobacter capsulatus''<br />
+**[[1ji4]] – BFR – ''Helicobacter pylori''<br />
+**[[1nf4]], [[1nf6]], [[1nfv]] – BFR – ''Desulfovibrio desulfuricans''<br />
+**[[3fvb]] – BmBFR - ''Brucelia melitensis''<br />
+**[[2fkz]], [[2fl0]], [[1sof]] – BFR – ''Azotobacrter vinelandii''<br />
+**[[2wtl]], [[3qb9]], [[3uof]], [[3uoi]] – BFR – ''Mycobacterium tuberculosis''<br />
+**[[3bkn]] - MsBFR – ''Mycobacterium smegmatis''<br />
+**[[3is7]], [[3is8]], [[3ise]], [[3isf]], [[3r2h]], [[3r2k]], [[3r2l]], [[3r2m]], [[3r2o]], [[3r2r]], [[3r2s]] – BFR – ''Pseudomonas aeruginosa''<br />
+**[[1bfr]], [[1bcf]], [[2htn]], [[2vxi]], [[3e1j]], [[3e1l]], [[3e1m]], [[3e1n]], [[3e1p]], [[3e1o]], [[3e1q]], [[2y3q]]  – EcBFR <br />
+**[[3e2c]], [[3ghq]] – EcBFR (mutant)<br />
+**[[4am2]], [[4am4]], [[4am5]] – BFR – ''Blastochloris viridis''
-[[2vzb]] – TFR – ''Bacterioides fragilis''
+*Thioferritin (TFR)
-===DNA-binding Protein of Starved cells (Dps) ===
+**[[2vzb]] – TFR – ''Bacterioides fragilis''
-[[3iq1]] – VcDps <br />
+*DNA-binding Protein of Starved cells (Dps)
-[[3ge4]] – BmDps <br />
-[[2iy4]] – Dps – ''Listeria monocytogenes''<br />
-[[2bkc]], [[2bk6]], [[2bjy]] – LiDps (mutant) <br />
-[[2f7n]] – Dps – ''Deinococcus radiodurans''<br />
-[[1tjo]], [[1tk6]], [[1tkp]], [[1tko]], [[1moj]] – Dps – ''Halobacterium salinarum''<br />
-[[1o9r]] – Dps – ''Agrobacterium tumefaciens''<br />
-[[1dps]], [[1f30]], [[1f33]], [[1jre]] – EcDps <br />
-[[1jts]], [[1l8h]], [[1l8i]] – EcDps (mutant)<br />
-[[2ux1]], [[2v15]], [[2xjm]], [[2xjn]], [[2xjo]], [[2xkq]] – Dps – ''Streptococcus suis''<br />
-[[2yw6]] – MsDps<br />
-[[3ak8]], [[3ak9]] – Dps – ''Salmonella enterica''<br />
-[[1n1q]] – Dps – ''Brevibacillus brevis''<br />
-[[1vei]], [[1vel]], [[1veq]], [[2yw7]] – MsDps<br />
-[[4dyu]] – Dpo – ''Yersinia pestis''
-===MrgA===
+**[[3iq1]] – VcDps <br />
+**[[3ge4]] – BmDps <br />
+**[[2iy4]] – Dps – ''Listeria monocytogenes''<br />
+**[[2bkc]], [[2bk6]], [[2bjy]] – LiDps (mutant) <br />
+**[[2f7n]] – Dps – ''Deinococcus radiodurans''<br />
+**[[1tjo]], [[1tk6]], [[1tkp]], [[1tko]], [[1moj]] – Dps – ''Halobacterium salinarum''<br />
+**[[1o9r]] – Dps – ''Agrobacterium tumefaciens''<br />
+**[[1dps]], [[1f30]], [[1f33]], [[1jre]] – EcDps <br />
+**[[1jts]], [[1l8h]], [[1l8i]] – EcDps (mutant)<br />
+**[[2ux1]], [[2v15]], [[2xjm]], [[2xjn]], [[2xjo]], [[2xkq]] – Dps – ''Streptococcus suis''<br />
+**[[2yw6]] – MsDps<br />
+**[[3ak8]], [[3ak9]] – Dps – ''Salmonella enterica''<br />
+**[[1n1q]] – Dps – ''Brevibacillus brevis''<br />
+**[[1vei]], [[1vel]], [[1veq]], [[2yw7]] – MsDps<br />
+**[[4dyu]] – Dpo – ''Yersinia pestis''
-[[2chp]] – MrgA – ''Bacillus subtilis''<br />
+*MrgA
+**[[2chp]] – MrgA – ''Bacillus subtilis''<br />
+}}
 [[Category:Topic Page]]