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| *HpyI ENN | | *HpyI ENN |
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| **[[3fc3]], [[3gox – HpENN99 + DNA – ''Helicobacter pylori''<br /> | | **[[3fc3]], [[3gox]] – HpENN99 + DNA – ''Helicobacter pylori''<br /> |
| **[[3or3]] – HpENN88 + DNA | | **[[3or3]] – HpENN88 + DNA |
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Revision as of 16:23, 24 November 2014
Template:STRUCTURE 1rva
Endonuclease (ENN) cleaves phosphodiester bond within polynucleotide chain. ENN cleaves DNA at a restriction site which is usually a 6-nucleotide palindrome. ENN is restriction site–specific. Various types of ENN differ by their mechanism of action. ENN is used in genetic engineering to make recombinant DNA. ENN requires a restriction site and a cleavage pattern. ENN-I operates on DNA with separate restriction site and cleavage pattern, while ENN-II operates on overlapping restriction site and cleavage pattern. Some ENNs are encoded within introns thus facilitating their mobility. These ENNs or inteins are designated I-ENN. See also
3D structures of endonuclease3D structures of endonuclease
Updated on 24-November-2014
{"openlevels":0}
- ENN-I
- 1bix - hENN – human
- 1cfr – ENN – Citrobacter freundii
- 1af5 - CrENN – Chlamydomonas reinhardtii
- 1fzr, 1m0d, 1m0i, 3cae – T7ENN - Enterobacteria phage T7
- 2g7e, 2g7f – VcENN – Vibrio cholera
- 2vnd - VcENN (mutant)
- 2pu3 - VsENN – Vibrio salmonicida
- ENN-II
- 1pvi, 1pvu - ENN – Proteus vulgaris
- 2wsh - T4ENN (mutant) - Enterobacteria phage T4
- 3w52 – ENN – Arabidopsis thaliana
- ENN-III
- 2abk, 1ako - EcENN – Escherichia coli
- 1orn, 1orp, 1p59 - GsENN + DNA – Geobacillus stearothermophilus
- ENN-IV
- 1qtw - EcENN
- 2nqh - EcENN (mutant)
- 1qum – EcENN + DNA
- 2nqj, 2nq9, 4k1g - EcENN (mutant) + DNA
- 1xp3 - ENN – Bacillus anthracis
- 3aal - GkENN – Geobacillus kaustophilus
- 3aam - TtENN – Thermus thermophilus
- ENN-V
- ENN-VII
- ENN-VIII
- EcoKI ENN
- Ecoo109I ENN
- EcoRI ENN
- EcoRII ENN
- EcoRV ENN
- 1rve, 1az3 – EcENN
- 1az4 - EcENN (mutant)
- 2rve, 4rve, 1rva, 1rvb, 1rvc, 1az0, 1bsu, 1bua, 1bgb, 1rv5, 1b94, 1b95, 1eo3, 1eo4, 1eon, 1eoo, 1eop, 2b0d, 2b0e - EcENN + DNA
- 1bss, 1b96, 1b97, 1stx, 1suz, 1sx5, 1sx8, 2ge5 - EcENN (mutant) + DNA
- BamHI ENN
- FokI ENN
- 1fok – PoENN + DNA – Planomicrobium okeanokoites
- 2fok – PoENN
- PvuII ENN
- tRNA-splicing ENN
- 1a79, 1a76, 1a77 - MjENN – Methanocaldococcus jannaschii
- 2cv8 - ENN – Sulfolobus tokodaii
- 2gw6 – hENN subunit sen15 – NMR
- 2gjw - AfENN + RNA – Archaeoglobus fulgidus
- 1r0v, 1r11 – AfENN
- 2ohc, 2ohe - TaENN – Thermoplasma acidophilum
- 2zyz – ENN – Pyrobaculum aerophilum
- 3iey - ENN + NEQ261 – Nanoarchaeum equitans
- 3ajv - ApENN (mutant) – Aeropyrum pernix
- 3p1y - ApENN /AfENN
- 3p1z - ApENN + protein
- VSR ENN
- BglI ENN
- BglII ENN
- MunI ENN
- 1d02 - ENN (mutant) + DNA - Mycoplasma
- Sm ENN
- NaeI ENN
- 1ev7 - LaENN – Lechevalieria aerocolonigenes
- 1iaw - LaENN + DNA
- NgoMIV ENN
- 1fiu, 4abt - ENN + DNA – Neisseria gonorrheae
- NEI ENN
- BsoBI ENN
- Bse634I ENN
- HincII ENN
- 1kc6, 1tw8, 1xhu, 1xhv, 1tx3, 2gie - HiENN + DNA – Haemophilus influenza
- 2gig, 2gih, 2gii, 2gij, 3e3y, 3e40, 3e41, 3e42, 3e43, 3e44, 3e45, 3ebc - HiENN (mutant) + DNA
- 2aud – HiENN
- HinDIII ENN
- HinP1I ENN
- Flap ENN
- 1mc8 - ENN (mutant) – Pyrococcus horikoshii
- 3ory– ENN – Desulfurococcus amylolyticus
- 3q8k, 3q8l, 3q8m - hENN + DNA
- 1rxv, 1rxw - AfENN + DNA
- 1ul1 - hENN + PCNA
- 2izo - SsENN + PCNA – Sulfolobus solfataricus
- 1a76, 1a77 - MjENN
- 1b43 – PfENN – Pyrococcus furiosus
- 1rxz - AfENN + PCNA
- DNA mismatch ENN
- Vvn ENN
- BfiI ENN
- 2c1l – ENN – Bacillus firmus
- SfiI ENN
- Ecl18kI ENN
- 2fqz, 2gb7 – ENN + DNA – Enterobacter cloacae
- SdaI ENN
- 2ixs – ENN – Streptomyces diastaticus
- PabI ENN
- 2dvy – ENN – Pyrococcus abyssi
- PspGI ENN
- NHN ENN
- 2qgp – ENN – Geobacter metallireducens
- UV damage ENN
- NotI ENN
- 3bvq - NoENN – Nocardia otitidiscaviarum
- 3c25 - NoENN + DNA
- BpujI ENN
- Sau3AI ENN
- 2reu – ENN C terminal – Staphylococcus aureus
- HpyI ENN
- 3fc3, 3gox – HpENN99 + DNA – Helicobacter pylori
- 3or3 – HpENN88 + DNA
- PacI ENN
- 3ldy, 3m7k - PaENN + DNA – Psdeudomonas alcaligenes
- Crossover junction ENN
- OkrAI ENN
- 3odh - ENN + DNA – Oceanobacter kriegii
- BspD6I ENN
- ThaI ENN
- Xpf ENN
- 1z00, 2a1j - hENN C terminal + DNA excision repair protein
- 2bgw - ApENN + DNA
- 2bhn - ApENN
- Intron-encoded endonuclease
- I-PpoI ENN
- I-CreI ENN
- 1bp7, 1g9y, 1g9z, 1n3e, 1n3f, 2vbj, 2vbl, 2vbn, 2vbo, 4aqu, 4aqx - CrENN + DNA
- 1u0c, 1u0d, 1t9i, 1t9j, 2i3p, 2i3q, 4aab, 4aad, 4aae, 4aaf, 4aag - CrENN (mutant) + DNA
- 2o7m - CrENN
- I-CeuI ENN
- 2ex5 - ENN (mutant) + DNA – Chlamydomonas eugametos
- I-DmoI ENN
- 1b24, 2vs7, 2vs8 - DmENN + DNA – Desulfurococcus mobilis
- 1mow – DmENN/CrENN + DNA
- I-AniI ENN
- 1p8k, 2qoj, 3uvf - EnENN + DNA – Emericella nidulans
- 3eh8 - EnENN (mutant) + DNA
- I-HmuI ENN
- 1u3e - ENN + DNA – Bacillus phage spo1
- I-TevI ENN
- I-SceI ENN
- I-PkoII ENN
- 2cw7, 2cw8 – ENN – Thermococcus kodakarensis
- I-MspI ENN
- I-PfuI ENN
- I-Tsp061I ENN
- 2dch – ENN – Thermoproteus
- I-Vdi141I ENN
- 3e54 – ENN – Vulcanisaeta distribute
- I-MtuI ENN
- 3ifj, 3igd - MtENN (mutant) – Mycobacterium tuberculosis
- 2l8l - MtENN
- I-MsoI ENN
- 1m5x, 3fd2 – MoENN + DNA – Monomastix
- 3ko2 – MoENN (mutant) + DNA
- I-GzeMII ENN
- 4efj – ENN + DNA – Gibberella zeae
- I-tRNA ENN
- 4fz2 – MoENN – Candidatus micrarchaeum
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