Exonuclease: Difference between revisions

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Alexander Berchansky, Joel L. Sussman

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 Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
+{{#tree:id=OrganizedByTopic|openlevels=0|
-===ExN-I===
+*ExN-I
-[[1fxx]], [[3c95]] – EcExN-I – ''Escherichia coli''<br />
-[[2qxf]] - EcExN-I + TMP<br />
-[[3hl8]], [[3hp9]] - EcExN-I + inhibitor<br />
-[[3c94]] - EcExN-I + DNA-binding C terminal peptide<br />
-[[4jrp]], [[4jrq]] – EcExN-I + oligonucleotide<br />
-[[3qe9]] – hExN-I (mutant) + DNA – human<br />
-[[3qea]], [[3qeb]] - hExN-I + DNA
-===ExN-III===
+**[[1fxx]], [[3c95]] – EcExN-I – ''Escherichia coli''<br />
+**[[2qxf]] - EcExN-I + TMP<br />
+**[[3hl8]], [[3hp9]] - EcExN-I + inhibitor<br />
+**[[3c94]] - EcExN-I + DNA-binding C terminal peptide<br />
+**[[4jrp]], [[4jrq]] – EcExN-I + oligonucleotide<br />
+**[[3qe9]] – hExN-I (mutant) + DNA – human<br />
+**[[3qea]], [[3qeb]] - hExN-I + DNA
-[[2voa]] – AfExN-III (mutant) + DNA – ''Archaeoglobus fulgidus''<br />
+*ExN-III
-[[3g1k]] - MtExN-III – ''Methanothermobacter thermaautotrophicus''<br />
-[[3g3c]], [[3g4t]] - MtExN-III + DNA<br />
-[[3fzi]], [[3g8v]], [[3g91]] - MtExN-III (mutant) <br />
-[[3g00]], [[3g0r]], [[3g2c]], [[3g2d]], [[3g38]], [[3g3y]], [[3ga6]] - MtExN-III (mutant) + DNA<br />
-[[3g0a]] - MtExN-III (mutant) + Mn<br />
-[[1ako]] – EcExN-III
-===ExN-IV===
+**[[2voa]] – AfExN-III (mutant) + DNA – ''Archaeoglobus fulgidus''<br />
+**[[3g1k]] - MtExN-III – ''Methanothermobacter thermaautotrophicus''<br />
+**[[3g3c]], [[3g4t]] - MtExN-III + DNA<br />
+**[[3fzi]], [[3g8v]], [[3g91]] - MtExN-III (mutant) <br />
+**[[3g00]], [[3g0r]], [[3g2c]], [[3g2d]], [[3g38]], [[3g3y]], [[3ga6]] - MtExN-III (mutant) + DNA<br />
+**[[3g0a]] - MtExN-III (mutant) + Mn<br />
+**[[1ako]] – EcExN-III
-[[2jc4]] – ExN-IV – ''Nisseria meningitides''
+*ExN-IV
-===ExN-V===
+**[[2jc4]] – ExN-IV – ''Nisseria meningitides''
-[[1w36]], [[3k70]] – EcExN-V α+β+γ + DNA hairpin<br />
+*ExN-V
-[[3e1s]] - EcExN-V RECD subunit<br />
-[[3gp8]] - DrExN-V RECD subunit + DNA – ''Deinococcus radiodurans''<br />
-[[3gpl]] - DrExN-V RECD subunit + DNA + ADPNP
-===ExN-VII===
+**[[1w36]], [[3k70]] – EcExN-V α+β+γ + DNA hairpin<br />
+**[[3e1s]] - EcExN-V RECD subunit<br />
+**[[3gp8]] - DrExN-V RECD subunit + DNA – ''Deinococcus radiodurans''<br />
+**[[3gpl]] - DrExN-V RECD subunit + DNA + ADPNP
-[[1vp7]] – ExN-VII small subunit – ''Bordetella pertussis''
+*ExN-VII
-===ExN-VIII===
+**[[1vp7]] – ExN-VII small subunit – ''Bordetella pertussis''
-[[3h4r]] - EcExN-VIII C terminal (mutant)
+*ExN-VIII
-===Phage ExN===
+**[[3h4r]] - EcExN-VIII C terminal (mutant)
-[[1ut5]], [[1ut8]] – T5-5’-ExN + metal – Bacteriophage T5<br />
+*Phage ExN
-[[1exn]], [[1xo1]] - T5-5’-ExN (mutant)<br />
-[[1avq]] – BlExN λ (mutant) – Bacteriophage λ<br />
-[[3slp]] - BlExN λ + DNA<br />
-[[3sm4]] - BlExN λ (mutant) + DNA<br />
-[[3k93]] – ExN – Haemophilus somnus
-===Exosome complex ExN===
+**[[1ut5]], [[1ut8]] – T5-5’-ExN + metal – Bacteriophage T5<br />
+**[[1exn]], [[1xo1]] - T5-5’-ExN (mutant)<br />
+**[[1avq]] – BlExN λ (mutant) – Bacteriophage λ<br />
+**[[3slp]] - BlExN λ + DNA<br />
+**[[3sm4]] - BlExN λ (mutant) + DNA<br />
+**[[3k93]] – ExN – Haemophilus somnus
-[[2ba1]] – AfExN Rrp41<br />
+*Exosome complex ExN
-[[2br2]] – SsExN-I + ExN-II – ''Sulfolobus solfataricus''<br />
-[[2jea]], [[2je6]], [[2jeb]] - SsExN-I (mutant) + ExN-II + RNA-binding protein 1<br />
-[[2hbj]], [[2hbk]], [[2hbl]], [[2hbm]] – yExN Rrp6 (mutant) <br />
-[[2ja9]] – yExN Rrp40<br />
-[[2vnu]] – yExN Rrp44 + DNA<br />
-[[2wp8]] - yExN Rrp45, Ski6, Dis3<br />
-[[2ioc]] - hExN Trex1 N terminal<br />
-[[2nn6]] – hExN Rrp41, Rrp45, Rrp42, Rrp40, Prp43, Rrp46, Mtr3, Csl4, Rrp4<br />
-[[4ifd]] - yExN Rrp6, Rrp45, Rrp42, Rrp40, Prp43, Rrp46, Mtr3, Csl4, Rrp4, Rrp6, Ski6, Dis3 + RNA<br />
-===Various ExN===
+**[[2ba1]] – AfExN Rrp41<br />
+**[[2br2]] – SsExN-I + ExN-II – ''Sulfolobus solfataricus''<br />
+**[[2jea]], [[2je6]], [[2jeb]] - SsExN-I (mutant) + ExN-II + RNA-binding protein 1<br />
+**[[2hbj]], [[2hbk]], [[2hbl]], [[2hbm]] – yExN Rrp6 (mutant) <br />
+**[[2ja9]] – yExN Rrp40<br />
+**[[2vnu]] – yExN Rrp44 + DNA<br />
+**[[2wp8]] - yExN Rrp45, Ski6, Dis3<br />
+**[[2ioc]] - hExN Trex1 N terminal<br />
+**[[2nn6]] – hExN Rrp41, Rrp45, Rrp42, Rrp40, Prp43, Rrp46, Mtr3, Csl4, Rrp4<br />
+**[[4ifd]] - yExN Rrp6, Rrp45, Rrp42, Rrp40, Prp43, Rrp46, Mtr3, Csl4, Rrp4, Rrp6, Ski6, Dis3 + RNA<br />
-[[1ir6]], [[2zxo]], [[2zxp]], [[2zxr]] – ExN Recj – ''Thermus thermophiles''<br />
+*Other ExN
-[[1w0h]] – hExn Eri1 nuclease domain <br />
-[[1zbu]] - hExn Eri1<br />
-[[1zbh]] - hExn Eri1 (mutant) + DNA<br />
-[[1y97]] – hExN Trex2<br />
-[[3zdk]] – hExN Apollo<br />
-[[2o4g]] - mExN Trex1 + nucleotide – mouse<br />
-[[3mxj]] - mExN Trex1<br />
-[[2o4i]], [[3mxi]], [[3mxm]], [[3u3y]], [[3u6f]] - mExN Trex1 (mutant) + polynucleotide<br />
-[[2oa8]] - mExN Trex1 + DNA<br />
-[[3b6o]], [[3b6p]] - mExN Trex1 + ion inhibitor<br />
-[[2w45]] – H4ExN alkaline - Herpesvirus 4<br />
-[[2w4b]] - H4ExN alkaline (mutant)<br />
-[[3syy]] - LhExN alkaline – ''Laribacter hongkongensis''<br />
-[[3sz4]] - LhExN alkaline + AMP<br />
-[[3sz5]] - LhExN alkaline + polynucleotide<br />
-[[3e2v]] – yExN - yeast
+**[[1ir6]], [[2zxo]], [[2zxp]], [[2zxr]] – ExN Recj – ''Thermus thermophiles''<br />
+**[[1w0h]] – hExn Eri1 nuclease domain <br />
+**[[1zbu]] - hExn Eri1<br />
+**[[1zbh]] - hExn Eri1 (mutant) + DNA<br />
+**[[1y97]] – hExN Trex2<br />
+**[[3zdk]] – hExN Apollo<br />
+**[[2o4g]] - mExN Trex1 + nucleotide – mouse<br />
+**[[3mxj]] - mExN Trex1<br />
+**[[2o4i]], [[3mxi]], [[3mxm]], [[3u3y]], [[3u6f]] - mExN Trex1 (mutant) + polynucleotide<br />
+**[[2oa8]] - mExN Trex1 + DNA<br />
+**[[3b6o]], [[3b6p]] - mExN Trex1 + ion inhibitor<br />
+**[[2w45]] – H4ExN alkaline - Herpesvirus 4<br />
+**[[2w4b]] - H4ExN alkaline (mutant)<br />
+**[[3syy]] - LhExN alkaline – ''Laribacter hongkongensis''<br />
+**[[3sz4]] - LhExN alkaline + AMP<br />
+**[[3sz5]] - LhExN alkaline + polynucleotide<br />
+**[[3e2v]] – yExN - yeast
+}}
 [[Category:Topic Page]]