Aspartate carbamoyltransferase: Difference between revisions

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Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
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===ATC===
*ATC


[[2atc]], [[3at1]], [[6at1]], [[1pg5]], [[3d7s]] – EcATC C+R subunits  – ''Escherichia coli''<br />
**[[2atc]], [[3at1]], [[6at1]], [[1pg5]], [[3d7s]] – EcATC C+R subunits  – ''Escherichia coli''<br />
[[9atc]]  – EcATC C (mutant) + R (mutant) subunits  <br />
**[[9atc]]  – EcATC C (mutant) + R (mutant) subunits  <br />
[[1ezz]], [[4e2f]] – EcATC C (mutant) + R subunits  <br />
**[[1ezz]], [[4e2f]] – EcATC C (mutant) + R subunits  <br />
[[2qg9]], [[2qgf]]  – EcATC C + R (mutant) subunits  <br />
**[[2qg9]], [[2qgf]]  – EcATC C + R (mutant) subunits  <br />
[[2be7]]  – ATC C (mutant) + R subunits – ''Moritella profunda'' <br />
**[[2be7]]  – ATC C (mutant) + R subunits – ''Moritella profunda'' <br />


===ATC binary complex===
*ATC binary complex


[[1at1]]  – EcATC C+R subunits  + malonate<br />
**[[1at1]]  – EcATC C+R subunits  + malonate<br />
[[1sku]]  – EcATC C (mutant) +R subunits  + malonate<br />
**[[1sku]]  – EcATC C (mutant) +R subunits  + malonate<br />
[[1r0b]]  – EcATC C+R subunits  + citrate<br />
**[[1r0b]]  – EcATC C+R subunits  + citrate<br />
[[1r0c]]  – EcATC C+R subunits  + N-carbamoyl-L-aspartate + phosphate<br />
**[[1r0c]]  – EcATC C+R subunits  + N-carbamoyl-L-aspartate + phosphate<br />
[[1xjw]]  – EcATC C (mutant) +R subunits  + phosphonacetyl-L-aspartate <br />
**[[1xjw]]  – EcATC C (mutant) +R subunits  + phosphonacetyl-L-aspartate <br />
[[1sku]]  – EcATC C (mutant) +R subunits  + phosphonoacetamide<br />
**[[1sku]]  – EcATC C (mutant) +R subunits  + phosphonoacetamide<br />
[[1tu0]]  – EcATC C+R subunits  + maltose<br />
**[[1tu0]]  – EcATC C+R subunits  + maltose<br />
[[4at1]]  – EcATC C+R subunits  + ATP<br />
**[[4at1]]  – EcATC C+R subunits  + ATP<br />
[[5at1]], [[1raa]], [[1rab]], [[1rac]], [[1rad]], [[1rae]], [[1raf]], [[1rag]], [[1rah]], [[1rai]], [[1za1]], [[4fyw]] – EcATC C+R subunits  + CTP<br />
**[[5at1]], [[1raa]], [[1rab]], [[1rac]], [[1rad]], [[1rae]], [[1raf]], [[1rag]], [[1rah]], [[1rai]], [[1za1]], [[4fyw]] – EcATC C+R subunits  + CTP<br />
[[8atc]], [[1acm]], [[1d09]], [[1q95]] – EcATC C+R subunits  + phosphonacetyl aspartate<br />
**[[8atc]], [[1acm]], [[1d09]], [[1q95]] – EcATC C+R subunits  + phosphonacetyl aspartate<br />
[[1f1b]], [[1i5o]], [[1tth]]  – EcATC C (mutant) +R subunits  + phosphonacetyl aspartate<br />
**[[1f1b]], [[1i5o]], [[1tth]]  – EcATC C (mutant) +R subunits  + phosphonacetyl aspartate<br />
[[2h3e]] – EcATC C+R subunits  + phosphonacetyl asparagine<br />
**[[2h3e]] – EcATC C+R subunits  + phosphonacetyl asparagine<br />
[[1nbe]]  – EcATC C (mutant) + R (mutant) subunits  + malate<br />
**[[1nbe]]  – EcATC C (mutant) + R (mutant) subunits  + malate<br />
[[2a0f]]  – EcATC C (mutant) +R subunits + phosphonoacetamide<br />
**[[2a0f]]  – EcATC C (mutant) +R subunits + phosphonoacetamide<br />
[[3mpu]]  – EcATC C (mutant) +R subunits + phosphate<br />
**[[3mpu]]  – EcATC C (mutant) +R subunits + phosphate<br />
[[2be9]] – ATC C+R subunits  + CTP – ''Sulfolobus acidocaldarius''<br />
**[[2be9]] – ATC C+R subunits  + CTP – ''Sulfolobus acidocaldarius''<br />
[[2yww]] – ATC R subunit + ATP – ''Methanocaldococcus jannaschii''<br />
**[[2yww]] – ATC R subunit + ATP – ''Methanocaldococcus jannaschii''<br />


===ATC ternary complex===
*ATC ternary complex


[[7at1]]  – EcATC C+R subunits  + ATP + maltose<br />
**[[7at1]]  – EcATC C+R subunits  + ATP + maltose<br />
[[8at1]]  – EcATC C+R subunits  + CTP + maltose<br />
**[[8at1]]  – EcATC C+R subunits  + CTP + maltose<br />
[[4fyv]]  – EcATC C+R subunits  + dCTP + phosphate<br />
**[[4fyv]]  – EcATC C+R subunits  + dCTP + phosphate<br />
[[4fyx]]  – EcATC C+R subunits  + dCTP + UTP<br />
**[[4fyx]]  – EcATC C+R subunits  + dCTP + UTP<br />
[[4fyy]]  – EcATC C+R subunits  + CTP + UTP<br />
**[[4fyy]]  – EcATC C+R subunits  + CTP + UTP<br />
[[1za2]]  – EcATC C+R subunits  + CTP + phosphoric monoformamide ester<br />
**[[1za2]]  – EcATC C+R subunits  + CTP + phosphoric monoformamide ester<br />
[[2air]]  – EcATC C+R subunits  + L-alanosine + phosphoric monoformamide ester<br />
**[[2air]]  – EcATC C+R subunits  + L-alanosine + phosphoric monoformamide ester<br />
[[2fzc]], [[2fzg]] – EcATC C+R subunits  + CTP + phosphonic acid derivative<br />
**[[2fzc]], [[2fzg]] – EcATC C+R subunits  + CTP + phosphonic acid derivative<br />
[[2fzk]] – EcATC C+R subunits + CTP + phosphonacetyl benzoate<br />
**[[2fzk]] – EcATC C+R subunits + CTP + phosphonacetyl benzoate<br />
[[4f04]], [[4kgv]], [[4kgx]], [[4kgz]], [[4kh0]] – EcATC C+R subunits + nucleotide + phosphonacetyl aspartate<br />
**[[4f04]], [[4kgv]], [[4kgx]], [[4kgz]], [[4kh0]] – EcATC C+R subunits + nucleotide + phosphonacetyl aspartate<br />
[[2h3e]] – EcATC C+R subunits  + phosphonacetyl asparagine + malate<br />
**[[2h3e]] – EcATC C+R subunits  + phosphonacetyl asparagine + malate<br />


===ATC quaternary complex===
*ATC quaternary complex
 
[[1tug]]  – EcATC C (mutant) +R subunits + phosphate + aspartate + phosphonoacetamide<br />
[[1tug]]  – EcATC C (mutant) +R subunits + CTP + malonate + phosphonoacetamide<br />
[[4kh1]] – EcATC C+R subunits + UTP + CTP + phosphate + phosphonacetyl aspartate<br />


**[[1tug]]  – EcATC C (mutant) +R subunits + phosphate + aspartate + phosphonoacetamide<br />
**[[1tug]]  – EcATC C (mutant) +R subunits + CTP + malonate + phosphonoacetamide<br />
**[[4kh1]] – EcATC C+R subunits + UTP + CTP + phosphate + phosphonacetyl aspartate<br />


}}


== References ==
== References ==

Revision as of 11:57, 18 November 2014

<StructureSection load='1raa' size='340' side='right' caption='Structure of E. coli aspartate carbamoyltransferase catalytic (grey and pink) and regulatory (green and yellow) subunits complex with CTP (stick figure) and Zn+2 (grey) (PDB code 1raa).' scene=>

FunctionFunction

Aspartate carbamoyltransferase (ATC) is part of the pyrimidine biosynthesis pathway. ATC catalyzes the condensation of aspartate and carbamoyl phosphate to N-carbamyl-L-aspartate and phosphate. ATC is composed of 2 trimers of catalytic subunits (C) and 3 dimers of regulatory subunits (R). The catalytic subunit contains an aspartate-binding domain and a carbamoyl-phosphate-binding domain. The regulatory subunit contains a nucleotide effectors-binding domain and a zinc domain. The Zn atom is essential for the association of the subunits. Binding of the substrate to the catalytic subunits results in a high-affinity state while binding of CTP to the regulatory subunit results in a low-affinity state. Malate and phosphonoacetyl-L-aspartate are inhibitors of ATC.

DiseaseDisease

RelevanceRelevance

Structural highlightsStructural highlights

3D structures of aspartate carbamoyltransferase3D structures of aspartate carbamoyltransferase

Updated on 18-November-2014

ReferencesReferences

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Alexander Berchansky, Joel L. Sussman