3doc: Difference between revisions

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[[Image:3doc.png|left|200px]]
==Crystal Structure of TrkA glyceraldehyde-3-phosphate dehydrogenase from Brucella melitensis==
 
<StructureSection load='3doc' size='340' side='right' caption='[[3doc]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
{{STRUCTURE_3doc|  PDB=3doc  |  SCENE=  }}
== Structural highlights ==
 
<table><tr><td colspan='2'>[[3doc]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Brucella_melitensis_biovar_abortus_2308 Brucella melitensis biovar abortus 2308]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DOC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3DOC FirstGlance]. <br>
===Crystal Structure of TrkA glyceraldehyde-3-phosphate dehydrogenase from Brucella melitensis===
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene></td></tr>
 
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">TrkA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=359391 Brucella melitensis biovar Abortus 2308])</td></tr>
 
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3doc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3doc OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3doc RCSB], [http://www.ebi.ac.uk/pdbsum/3doc PDBsum], [http://www.topsan.org/Proteins/SSGCID/3doc TOPSAN]</span></td></tr>
==About this Structure==
</table>
[[3doc]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Brucella_melitensis_biovar_abortus_2308 Brucella melitensis biovar abortus 2308]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DOC OCA].  
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/do/3doc_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Brucella melitensis biovar abortus 2308]]
[[Category: Brucella melitensis biovar abortus 2308]]
[[Category: SSGCID, Seattle Structural Genomics Center for Infectious Disease.]]
[[Category: Structural genomic]]
[[Category: Brucella]]
[[Category: Brucella]]
[[Category: Oxidoreductase]]
[[Category: Oxidoreductase]]
[[Category: Protein structure initiative]]
[[Category: PSI, Protein structure initiative]]
[[Category: Psi]]
[[Category: Seattle structural genomics center for infectious disease]]
[[Category: Ssgcid]]
[[Category: Ssgcid]]
[[Category: Structural genomic]]

Revision as of 10:56, 12 November 2014

Crystal Structure of TrkA glyceraldehyde-3-phosphate dehydrogenase from Brucella melitensisCrystal Structure of TrkA glyceraldehyde-3-phosphate dehydrogenase from Brucella melitensis

Structural highlights

3doc is a 4 chain structure with sequence from Brucella melitensis biovar abortus 2308. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:
Gene:TrkA (Brucella melitensis biovar Abortus 2308)
Resources:FirstGlance, OCA, RCSB, PDBsum, TOPSAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3doc, resolution 2.40Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA