3e3m: Difference between revisions
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==Crystal structure of a LacI family transcriptional regulator from Silicibacter pomeroyi== | |||
<StructureSection load='3e3m' size='340' side='right' caption='[[3e3m]], [[Resolution|resolution]] 1.60Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[3e3m]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Ruegeria_pomeroyi Ruegeria pomeroyi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3E3M OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3E3M FirstGlance]. <br> | |||
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SPOA0242 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=89184 Ruegeria pomeroyi])</td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3e3m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3e3m OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3e3m RCSB], [http://www.ebi.ac.uk/pdbsum/3e3m PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/3e3m TOPSAN]</span></td></tr> | |||
</table> | |||
== | == Evolutionary Conservation == | ||
[[3e3m]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Ruegeria_pomeroyi Ruegeria pomeroyi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3E3M OCA]. | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e3/3e3m_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | |||
<div style="clear:both"></div> | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Ruegeria pomeroyi]] | [[Category: Ruegeria pomeroyi]] | ||
[[Category: Almo, S C | [[Category: Almo, S C]] | ||
[[Category: Bain, K T | [[Category: Bain, K T]] | ||
[[Category: Bonanno, J B | [[Category: Bonanno, J B]] | ||
[[Category: Burley, S K | [[Category: Burley, S K]] | ||
[[Category: Freeman, J | [[Category: Freeman, J]] | ||
[[Category: Iizuka, M | [[Category: Iizuka, M]] | ||
[[Category: | [[Category: Structural genomic]] | ||
[[Category: Ozyurt, S | [[Category: Ozyurt, S]] | ||
[[Category: Sauder, J M | [[Category: Sauder, J M]] | ||
[[Category: Smith, D | [[Category: Smith, D]] | ||
[[Category: Wasserman, S | [[Category: Wasserman, S]] | ||
[[Category: Dna-binding]] | [[Category: Dna-binding]] | ||
[[Category: New | [[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]] | ||
[[Category: PSI, Protein structure initiative]] | |||
[[Category: Protein structure initiative | |||
[[Category: Transcription]] | [[Category: Transcription]] | ||
[[Category: Transcription regulation]] | [[Category: Transcription regulation]] | ||
Revision as of 16:17, 6 November 2014
Crystal structure of a LacI family transcriptional regulator from Silicibacter pomeroyiCrystal structure of a LacI family transcriptional regulator from Silicibacter pomeroyi
Structural highlights
Evolutionary Conservation Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf. |
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