3hdo: Difference between revisions

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[[Image:3hdo.png|left|200px]]
==Crystal Structure of a Histidinol-phosphate aminotransferase from Geobacter metallireducens==
 
<StructureSection load='3hdo' size='340' side='right' caption='[[3hdo]], [[Resolution|resolution]] 1.61&Aring;' scene=''>
{{STRUCTURE_3hdo|  PDB=3hdo  |  SCENE=  }}
== Structural highlights ==
 
<table><tr><td colspan='2'>[[3hdo]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Geobacter_metallireducens_gs-15 Geobacter metallireducens gs-15]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HDO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3HDO FirstGlance]. <br>
===Crystal Structure of a Histidinol-phosphate aminotransferase from Geobacter metallireducens===
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
 
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
 
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">hisC, Gmet_0385 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=269799 Geobacter metallireducens GS-15])</td></tr>
==About this Structure==
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Histidinol-phosphate_transaminase Histidinol-phosphate transaminase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.6.1.9 2.6.1.9] </span></td></tr>
[[3hdo]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Geobacter_metallireducens_gs-15 Geobacter metallireducens gs-15]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HDO OCA].  
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3hdo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hdo OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3hdo RCSB], [http://www.ebi.ac.uk/pdbsum/3hdo PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/3hdo TOPSAN]</span></td></tr>
</table>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hd/3hdo_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Geobacter metallireducens gs-15]]
[[Category: Geobacter metallireducens gs-15]]
[[Category: Histidinol-phosphate transaminase]]
[[Category: Histidinol-phosphate transaminase]]
[[Category: Burley, S K.]]
[[Category: Burley, S K]]
[[Category: Damodharan, L.]]
[[Category: Damodharan, L]]
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
[[Category: Structural genomic]]
[[Category: Swaminathan, S.]]
[[Category: Swaminathan, S]]
[[Category: 11246f]]
[[Category: Amino-acid biosynthesis]]
[[Category: Amino-acid biosynthesis]]
[[Category: Aminotransferase]]
[[Category: Aminotransferase]]
[[Category: Histidine biosynthesis]]
[[Category: Histidine biosynthesis]]
[[Category: Histidinol-phosphate aminotransferase]]
[[Category: Histidinol-phosphate aminotransferase]]
[[Category: New york sgx research center for structural genomic]]
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]]
[[Category: Nysgxrc]]
[[Category: PSI, Protein structure initiative]]
[[Category: Protein structure initiative]]
[[Category: Psi-ii]]
[[Category: Pyridoxal phosphate]]
[[Category: Pyridoxal phosphate]]
[[Category: Structural genomic]]
[[Category: Transferase]]
[[Category: Transferase]]

Revision as of 15:43, 6 November 2014

Crystal Structure of a Histidinol-phosphate aminotransferase from Geobacter metallireducensCrystal Structure of a Histidinol-phosphate aminotransferase from Geobacter metallireducens

Structural highlights

3hdo is a 2 chain structure with sequence from Geobacter metallireducens gs-15. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:,
NonStd Res:
Gene:hisC, Gmet_0385 (Geobacter metallireducens GS-15)
Activity:Histidinol-phosphate transaminase, with EC number 2.6.1.9
Resources:FirstGlance, OCA, RCSB, PDBsum, TOPSAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3hdo, resolution 1.61Å

Drag the structure with the mouse to rotate

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OCA